RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ZWILCHQ9H900 591 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 CFAP97Q9P2B7 532 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 XPO7Q9UIA9 1087 aaKnown RBP17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 FZD10Q9ULW2 581 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 DOCK8Q8NF50 2099 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 FAM187AA6NFU0 413 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 APOEP02649 317 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 RARAP10276 462 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 OAS2P29728 719 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 CHRNA3P32297 505 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 GBP2P32456 591 aaPredicted RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 HARS2P49590 506 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 CYP1B1Q16678 543 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 SMTNL2Q2TAL5 461 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 ERMARDQ5T6L9 678 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 NUGGCQ68CJ6 796 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 RHOT1Q8IXI2 618 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 GSPT2Q8IYD1 628 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 RIN3Q8TB24 985 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 LRRC3BQ96PB8 259 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 TRPV4Q9HBA0 871 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 PRDM6Q9NQX0 595 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 PSTPIP1O43586 416 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 PHF2O75151 1096 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 PAGE1O75459 146 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 MOCS2O96007 188 aaPredicted RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 KRT7P08729 469 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 PYGMP11217 842 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 CORO1AP31146 461 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 GJC1P36383 396 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 VIPR2P41587 438 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 SCAPQ12770 1279 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 ZNF211Q13398 564 aaPredicted RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 ARL13BQ3SXY8 428 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 HSP90B2PQ58FF3 399 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 ALS2CLQ60I27 953 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 HTR3DQ70Z44 454 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 OTOP3Q7RTS5 596 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 POLNQ7Z5Q5 900 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 SLC13A5Q86YT5 568 aaPredicted RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 DENND1CQ8IV53 801 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 CELF5Q8N6W0 485 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 TTC16Q8NEE8 873 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 FAM71BQ8TC56 605 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 MAIP1Q8WWC4 291 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 ACSF2Q96CM8 615 aaPredicted RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 RSPRY1Q96DX4 576 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 SNRNP25Q9BV90 132 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 RAB17Q9H0T7 212 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 GPATCH2LQ9NWQ4 482 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 PCYOX1Q9UHG3 505 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 AMACRQ9UHK6 382 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 SLC12A6Q9UHW9 1150 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 NFU1Q9UMS0 254 aa17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 ZFP37Q9Y6Q3 630 aaPredicted RBP17.5■□□□□ 0.39
EXOSC3-203ENST00000465229 SCAMP3O14828 347 aaKnown RBP17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 TCF3P15923 654 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 FCARP24071 287 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 AIF1P55008 147 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 TFF2Q03403 129 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 SMAD2Q15796 467 aaKnown RBP17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 ZNF77Q15935 545 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 CA9Q16790 459 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 Q6ZNB5 142 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 DDX42Q86XP3 938 aaKnown RBP eCLIP17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 ATP6V0D2Q8N8Y2 350 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 C12orf50Q8NA57 414 aaPredicted RBP17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 ST13P5Q8NFI4 369 aaPredicted RBP17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 TEKT4Q8WW24 435 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 AZIN2Q96A70 460 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 BTN2A3PQ96KV6 586 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 HAPLN3Q96S86 360 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 DCLK3Q9C098 648 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 FAM114A2Q9NRY5 505 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 AGO1Q9UL18 857 aaKnown RBP17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 UTP11Q9Y3A2 253 aaKnown RBP17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 NR2E1Q9Y466 385 aa17.49■□□□□ 0.39
EXOSC3-203ENST00000465229 ZSCAN5CA6NGD5 496 aaPredicted RBP17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 H3BQF6 201 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 SP100P23497 879 aaPredicted RBP17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 DRG2P55039 364 aaKnown RBP17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 MLLT6P55198 1093 aaPredicted RBP17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 NADSYN1Q6IA69 706 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 TANGO2Q6ICL3 276 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 PSTKQ8IV42 348 aaKnown RBP17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 PYROXD2Q8N2H3 581 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 IFT81Q8WYA0 676 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 HSPH1Q92598 858 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 SIK2Q9H0K1 926 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 KIF9Q9HAQ2 790 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 EPS15L1Q9UBC2 864 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 AP4E1Q9UPM8 1137 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 SH3BP1Q9Y3L3 701 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 SNX10Q9Y5X0 201 aa17.48■□□□□ 0.39
EXOSC3-203ENST00000465229 E2F8A0AVK6 867 aa17.47■□□□□ 0.39
EXOSC3-203ENST00000465229 ACSL4O60488 711 aa17.47■□□□□ 0.39
EXOSC3-203ENST00000465229 SLC11A2P49281 568 aa17.47■□□□□ 0.39
EXOSC3-203ENST00000465229 USP4Q13107 963 aa17.47■□□□□ 0.39
EXOSC3-203ENST00000465229 EFHC2Q5JST6 749 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms