RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 VCPP55072 806 aaKnown RBP14.18□□□□□ -0.14
LIMD1-203ENST00000465039 HDAC4P56524 1084 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 RPL7AP62424 266 aaKnown RBP14.18□□□□□ -0.14
LIMD1-203ENST00000465039 SLC12A1Q13621 1099 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 DMC1Q14565 340 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 ZNF528Q3MIS6 628 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 CCDC122Q5T0U0 273 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 CHST9Q7L1S5 443 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 ANKS1BQ7Z6G8 1248 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 C12orf40Q86WS4 652 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 CHSY1Q86X52 802 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 NIPA2Q8N8Q9 360 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 FAM172AQ8WUF8 416 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 PRICKLE1Q96MT3 831 aaPredicted RBP14.18□□□□□ -0.14
LIMD1-203ENST00000465039 PPP1R9BQ96SB3 815 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 FAM126AQ9BYI3 521 aaPredicted RBP14.18□□□□□ -0.14
LIMD1-203ENST00000465039 ADAM33Q9BZ11 813 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 TKTL2Q9H0I9 626 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 OSBPL2Q9H1P3 480 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 PRMT8Q9NR22 394 aaPredicted RBP14.18□□□□□ -0.14
LIMD1-203ENST00000465039 CALCOCO1Q9P1Z2 691 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 FBXO4Q9UKT5 387 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 MTF2Q9Y483 593 aaPredicted RBP14.18□□□□□ -0.14
LIMD1-203ENST00000465039 IGLV3-10A0A075B6K4 115 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 PI15O43692 258 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 ADCY5O95622 1261 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 H2AFZP0C0S5 128 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 CISD3P0C7P0 127 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 TMEM253P0C7T8 217 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 TFE3P19532 575 aaPredicted RBP14.17□□□□□ -0.14
LIMD1-203ENST00000465039 ADRA1BP35368 520 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 PCK1P35558 622 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 GSDMDP57764 484 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 ATP11AP98196 1134 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 GFPT1Q06210 699 aaPredicted RBP14.17□□□□□ -0.14
LIMD1-203ENST00000465039 AUHQ13825 339 aaKnown RBP14.17□□□□□ -0.14
LIMD1-203ENST00000465039 PIGHQ14442 188 aaPredicted RBP14.17□□□□□ -0.14
LIMD1-203ENST00000465039 TCEAL1Q15170 157 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 LRRC31Q6UY01 552 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 H2AFVQ71UI9 128 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 KIAA0907Q7Z7F0 614 aaPredicted RBP14.17□□□□□ -0.14
LIMD1-203ENST00000465039 TMTC1Q8IUR5 882 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 FIBINQ8TAL6 211 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 THAP2Q9H0W7 228 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 FBRSL1Q9HCM7 1045 aaKnown RBP14.17□□□□□ -0.14
LIMD1-203ENST00000465039 PPARGC1AQ9UBK2 798 aaKnown RBP14.17□□□□□ -0.14
LIMD1-203ENST00000465039 HS3ST4Q9Y661 456 aa14.17□□□□□ -0.14
LIMD1-203ENST00000465039 SYNJ2BP-COX16A0A087WUM0 186 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 CXorf51AA0A1B0GTR3 108 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 TBC1D3BA6NDS4 549 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 K7EQS6 105 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 CCP110O43303 1012 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 CLDN11O75508 207 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 RNF8O76064 485 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 LUC7L3O95232 432 aaKnown RBP14.16□□□□□ -0.14
LIMD1-203ENST00000465039 IPO7O95373 1038 aaKnown RBP14.16□□□□□ -0.14
LIMD1-203ENST00000465039 EGFP01133 1207 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 DCNP07585 359 aaKnown RBP14.16□□□□□ -0.14
LIMD1-203ENST00000465039 CHRM1P11229 460 aaPredicted RBP14.16□□□□□ -0.14
LIMD1-203ENST00000465039 CYLC1P35663 651 aaPredicted RBP14.16□□□□□ -0.14
LIMD1-203ENST00000465039 KIR2DL1P43626 348 aaPredicted RBP14.16□□□□□ -0.14
LIMD1-203ENST00000465039 GALCP54803 685 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 CDH18Q13634 790 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 C15orf59Q2T9L4 293 aaPredicted RBP14.16□□□□□ -0.14
LIMD1-203ENST00000465039 RAP1GAP2Q684P5 730 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 RFWD3Q6PCD5 774 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 SYT13Q7L8C5 426 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 FAM131BQ86XD5 332 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 C1orf210Q8IVY1 113 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 RHOT2Q8IXI1 618 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 LGI2Q8N0V4 545 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 AHI1Q8N157 1196 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 USP33Q8TEY7 942 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 UCMAQ8WVF2 138 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 EZH1Q92800 747 aaPredicted RBP14.16□□□□□ -0.14
LIMD1-203ENST00000465039 CALR3Q96L12 384 aaKnown RBP14.16□□□□□ -0.14
LIMD1-203ENST00000465039 CHP1Q99653 195 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 DONSONQ9NYP3 566 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 COX16Q9P0S2 106 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 IP6K2Q9UHH9 426 aa14.16□□□□□ -0.14
LIMD1-203ENST00000465039 XPO7Q9UIA9 1087 aaKnown RBP14.16□□□□□ -0.14
LIMD1-203ENST00000465039 CCDC163A0A0D9SF12 145 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 DRGXA6NNA5 263 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 ATMINO43313 823 aaPredicted RBP14.15□□□□□ -0.14
LIMD1-203ENST00000465039 TBL1XO60907 577 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 RNF40O75150 1001 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 MTA2O94776 668 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 HNRNPLP14866 589 aaKnown RBP eCLIP14.15□□□□□ -0.141e-8■□□□□ 8.8
LIMD1-203ENST00000465039 PSMA2P25787 234 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 L1CAMP32004 1257 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 SLC6A11P48066 632 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 CDH4P55283 916 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 RPS24P62847 133 aaKnown RBP14.15□□□□□ -0.14
LIMD1-203ENST00000465039 MTAPQ13126 283 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 CDO1Q16878 200 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 EFHC2Q5JST6 749 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 MANEALQ5VSG8 457 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 FBXL22Q6P050 247 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 ZNF783Q6ZMS7 281 aa14.15□□□□□ -0.14
LIMD1-203ENST00000465039 SLFN11Q7Z7L1 901 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms