RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 CDK16Q00536 496 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 CST9Q5W186 159 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 STEAP4Q687X5 459 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 FAM13CQ8NE31 585 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 GORASP1Q9BQQ3 440 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 SYT15Q9BQS2 421 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 ST3GAL5Q9UNP4 418 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 SDR42E2A6NKP2 422 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 I3L4J1 428 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 CAPN9O14815 690 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 USP12O75317 370 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 ALDH1A2O94788 518 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 ANP32DO95626 131 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 KITP10721 976 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 EZRP15311 586 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 ERCC2P18074 760 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 NIPAL4Q0D2K0 466 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 PAFAH1B3Q15102 231 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 C16orf46Q6P387 395 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 BZW1Q7L1Q6 419 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 FAM35AQ86V20 835 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 ALYREFQ86V81 257 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 PSTKQ8IV42 348 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 E2F7Q96AV8 911 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 PGBD4Q96DM1 585 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 AGAP3Q96P47 875 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 TSPAN18Q96SJ8 248 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 FAM105AQ9NUU6 356 aa19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 MARCOQ9UEW3 520 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-210ENST00000464987 TTC3P53804 2025 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 CASTOR2A6NHX0 329 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 KLF11O14901 512 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 OPHN1O60890 802 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 ALDOAP04075 364 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 C6orf222P0C671 652 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 NCAM1P13591 858 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 ADRA1BP35368 520 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 SARNPP82979 210 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 TAF1CQ15572 869 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 TEX44Q53QW1 395 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 PID1Q7Z2X4 250 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 NPWQ8N729 165 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 STKLD1Q8NE28 680 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 EDEM1Q92611 657 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 MTBPQ96DY7 904 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 EBF2Q9HAK2 575 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 SIRPGQ9P1W8 387 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 NKX1-2Q9UD57 310 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 MCM8Q9UJA3 840 aa19.22■□□□□ 0.67
TSPAN4-210ENST00000464987 HAUS5O94927 633 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 MLNP12872 115 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 PTPN4P29074 926 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 CRYMQ14894 314 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 PDK1Q15118 436 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 NUDCD3Q8IVD9 361 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 HACE1Q8IYU2 909 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 KATNAL1Q9BW62 490 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 MKS1Q9NXB0 559 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 ARMCX1Q9P291 453 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 SCN10AQ9Y5Y9 1956 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 TRAFD1O14545 582 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 CCND1P24385 295 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 CRHR1P34998 444 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 SCNN1GP51170 649 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 MRPS6P82932 125 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 PAN2Q504Q3 1202 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 SPDYAQ5MJ70 313 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 PACS1Q6VY07 963 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 ARID3BQ8IVW6 561 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 PTCD3Q96EY7 689 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 DNAI2Q9GZS0 605 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 SAR1AQ9NR31 198 aa19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 MTO1Q9Y2Z2 717 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-210ENST00000464987 TPP1O14773 563 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 GSRP00390 522 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 IL1BP01584 269 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 RPSAP08865 295 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 ERVK-10P10266 1014 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 OCRLQ01968 901 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 ZBTB16Q05516 673 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 SEMA3BQ13214 749 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 MARK2Q7KZI7 788 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 BHLHA9Q7RTU4 235 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 TRPV1Q8NER1 839 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 OR52K1Q8NGK4 314 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 NMUR2Q9GZQ4 415 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 XPNPEP3Q9NQH7 507 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 LNPEPQ9UIQ6 1025 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 EMCNQ9ULC0 261 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 MAGED2Q9UNF1 606 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 TDRD15B5MCY1 1934 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 HHLA1C9JL84 531 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 PPP1R12AO14974 1030 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 CHRNA1P02708 482 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 THP07101 528 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 BPGMP07738 259 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 PTPN3P26045 913 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 SERPINB9P50453 376 aa19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 GDF6Q6KF10 455 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-210ENST00000464987 CXCL17Q6UXB2 119 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms