RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TBC1D3BA6NDS4 549 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TBC1D3FA6NER0 549 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TBC1D3LB9A6J9 549 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 M0QYT0 321 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TP73O15350 636 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 PPP6R2O75170 966 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TCEA3O75764 348 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TBC1D3HP0C7X1 549 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 AKR1A1P14550 325 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TGM2P21980 687 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 HOXA7P31268 230 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-205ENST00000464541 CHKAP35790 457 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 PNLIPRP1P54315 467 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 STIM1Q13586 685 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 ANXA2RQ3ZCQ2 193 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 EARS2Q5JPH6 523 aaKnown RBP6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TBC1D3GQ6DHY5 549 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 SULT6B1Q6IMI4 303 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TBC1D3CQ6IPX1 549 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 ZNF474Q6S9Z5 364 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TBC1D3Q8IZP1 549 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-205ENST00000464541 ZFPM2Q8WW38 1151 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 NPAS1Q99742 590 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TMEM79Q9BSE2 394 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 VPS16Q9H269 839 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TUBA8Q9NY65 449 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-205ENST00000464541 SLC12A4Q9UP95 1085 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 COL3A1P02461 1466 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-205ENST00000464541 CNOT3O75175 753 aaKnown RBP6.69□□□□□ -1.34
PTCD3-205ENST00000464541 RFPL3SP0C7P2 107 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 CTSAP10619 480 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 GYS1P13807 737 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 GRK6P43250 576 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 MMP13P45452 471 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 TRAPPC10P48553 1259 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 ID2Q02363 134 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 MTA1Q13330 715 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 GRAMD1BQ3KR37 738 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 TUBB8Q3ZCM7 444 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 PAPD7Q5XG87 772 aaKnown RBP6.69□□□□□ -1.34
PTCD3-205ENST00000464541 CCDC174Q6PII3 467 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 SLC2A7Q6PXP3 512 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 FAM47BQ8NA70 645 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 DENND1AQ8TEH3 1009 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 COQ8BQ96D53 544 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 GPR78Q96P69 363 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 HTATIP2Q9BUP3 242 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 MECRQ9BV79 373 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 TMEM120AQ9BXJ8 343 aa6.69□□□□□ -1.34
PTCD3-205ENST00000464541 ELAC1Q9H777 363 aaKnown RBP6.69□□□□□ -1.34
PTCD3-205ENST00000464541 TRPC5Q9UL62 973 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-205ENST00000464541 ZNF335Q9H4Z2 1342 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-205ENST00000464541 WDR91A4D1P6 747 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 C2CD4BA6NLJ0 364 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 CNTN5O94779 1100 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 CST5P28325 142 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-205ENST00000464541 MCM2P49736 904 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 SLC37A1P57057 533 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 C1QL2Q7Z5L3 287 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 RHPN2Q8IUC4 686 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 OR52N4Q8NGI2 321 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 SCAMP5Q8TAC9 235 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 SLC2A12Q8TD20 617 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 PAGR1Q9BTK6 254 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 ABHD14AQ9BUJ0 271 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 BRD8Q9H0E9 1235 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 GRHPRQ9UBQ7 328 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 RAB21Q9UL25 225 aa6.68□□□□□ -1.34
PTCD3-205ENST00000464541 IFRD1O00458 451 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-205ENST00000464541 TLR2O60603 784 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 KAT7O95251 611 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 VEGFAP15692 232 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-205ENST00000464541 ST6GAL1P15907 406 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 SERPINA4P29622 427 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 FAM3BP58499 235 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-205ENST00000464541 RPS6KA2Q15349 733 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 C10orf25Q5T742 122 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 DGAT2L7PQ6IED9 249 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 DHRS13Q6UX07 377 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 FAM57BQ71RH2 274 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 SDCCAG3Q96C92 435 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 MLXIPLQ9NP71 852 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 SAYSD1Q9NPB0 183 aa6.67□□□□□ -1.34
PTCD3-205ENST00000464541 IPO11Q9UI26 975 aaKnown RBP6.67□□□□□ -1.34
PTCD3-205ENST00000464541 COPG1Q9Y678 874 aaKnown RBP6.67□□□□□ -1.34
PTCD3-205ENST00000464541 SLC22A23A1A5C7 686 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 INO80B-WBP1J3KQ70 363 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 TOP3BO95985 862 aaKnown RBP6.66□□□□□ -1.34
PTCD3-205ENST00000464541 FGBP02675 491 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 CPA2P48052 419 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 PCP4P48539 62 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 ZNF91Q05481 1191 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 SRSF1Q07955 248 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTCD3-205ENST00000464541 PRKG1Q13976 671 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 Q4G0T1 1027 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 PXDC1Q5TGL8 231 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 LIPMQ5VYY2 423 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 ERAP2Q6P179 960 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 RFX8Q6ZV50 586 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 ADGRF3Q8IZF5 1079 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms