RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 PDZD7Q9H5P4 517 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 COPS7BQ9H9Q2 264 aaPredicted RBP11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 ELP3Q9H9T3 547 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 SLC38A7Q9NVC3 462 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 HACD3Q9P035 362 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 DCDC2Q9UHG0 476 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 LOC100653049A0A140TA62 436 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 TCRBV5S1A1TA0A578 114 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 ARHGEF37A1IGU5 675 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 RGSL1A5PLK6 1076 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 ZNF195O14628 629 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 MCF2LO15068 1137 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 KRT34O76011 436 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 LSM8O95777 96 aaKnown RBP11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 APOEP02649 317 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 ACO1P21399 889 aaKnown RBP11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 CDH3P22223 829 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 GNA15P30679 374 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 RPL7AP62424 266 aaKnown RBP11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 GTF2IP78347 998 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 CLDN10P78369 228 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 CEP55Q53EZ4 464 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 C2CD6Q53TS8 623 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 PIGGQ5H8A4 983 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 DNAJC24Q6P3W2 148 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 DCUN1D2Q6PH85 259 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 DCLRE1AQ6PJP8 1040 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 C4orf22Q6V702 233 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 MAP4K3Q8IVH8 894 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 UNC45BQ8IWX7 931 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 ADGRF2Q8IZF7 708 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 RP9Q8TA86 221 aaKnown RBP11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 ISOC1Q96CN7 298 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 GMCL1Q96IK5 515 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 CNDP1Q96KN2 507 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 PHF12Q96QT6 1004 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 DOK1Q99704 481 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 OLFM1Q99784 485 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 PKP2Q99959 881 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 GIN1Q9NXP7 522 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 PAK5Q9P286 719 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 ZC3H7BQ9UGR2 993 aaKnown RBP11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 CROTQ9UKG9 612 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 TBX20Q9UMR3 447 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 CDY2AQ9Y6F7 541 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 CDY1Q9Y6F8 540 aa11.83□□□□□ -0.52
TNRC6A-205ENST00000464539 SZT2Q5T011 3432 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 ZNFX1Q9P2E3 1918 aaKnown RBP11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 FAM159BA6NKW6 160 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 F8VP50 259 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 APOC4-APOC2K7ER74 178 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 ADAM23O75077 832 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 GSRP00390 522 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 APOC2P02655 101 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 GJB1P08034 283 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 COL6A2P12110 1019 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 TCF4P15884 667 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 GARTP22102 1010 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 ME2P23368 584 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 TBXAS1P24557 533 aaPredicted RBP11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 EIF3EP60228 445 aaKnown RBP11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 MRPS22P82650 360 aaKnown RBP11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 ZNF252P-AS1Q0IIN9 211 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 ZBTB17Q13105 803 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 SEPT6Q14141 434 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 RFTN1Q14699 578 aaPredicted RBP11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 CYTH1Q15438 398 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 MGAT5BQ3V5L5 792 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 DEPDC1Q5TB30 811 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 KRT80Q6KB66 452 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 OLFML1Q6UWY5 402 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 PGAM4Q8N0Y7 254 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 LILRA2Q8N149 483 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 CENPSQ8N2Z9 138 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 GPD1LQ8N335 351 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 GALNT4Q8N4A0 578 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 GMCL1P1Q8NEA9 526 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 PDCD6IPQ8WUM4 868 aaKnown RBP11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 TMIGD2Q96BF3 282 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 PPP1R10Q96QC0 940 aaKnown RBP11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 TSPAN18Q96SJ8 248 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 GID8Q9NWU2 228 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 SLC30A1Q9Y6M5 507 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 CENPFP49454 3210 aa11.82□□□□□ -0.52
TNRC6A-205ENST00000464539 CLRN2A0PK11 232 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 TRIM64BA6NI03 449 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 CXorf49A8MYA2 514 aaPredicted RBP11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 TBC1D12O60347 775 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 CNOT3O75175 753 aaKnown RBP11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 CALCAP01258 141 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 INHBBP09529 407 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 MCF2P10911 925 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 OSBPP22059 807 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 KDELR1P24390 212 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 MAGEA6P43360 314 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 HK2P52789 917 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 ABCE1P61221 599 aaKnown RBP11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 HERC3Q15034 1050 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 INAQ16352 499 aa11.81□□□□□ -0.52
TNRC6A-205ENST00000464539 IRAK1BP1Q5VVH5 260 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms