RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	C1QTNF7	Q9BXJ2	289 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	ARHGAP39	Q9C0H5	1083 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	NUAK2	Q9H093	628 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	SAYSD1	Q9NPB0	183 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	SAGE1	Q9NXZ1	904 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	KIF17	Q9P2E2	1029 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	B3GNT3	Q9Y2A9	372 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	PCDHA10	Q9Y5I2	948 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	TBC1D3D	A0A087WVF3	549 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TBC1D3I	A0A087WXS9	549 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TBC1D3E	A0A087X179	549 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TBC1D3K	A0A087X1G2	549 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TBC1D3B	A6NDS4	549 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	WIPF3	A6NGB9	483 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	FAM90A20P	A6NIJ5	464 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	LINC01548	A6NM66	108 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TBC1D3L	B9A6J9	549 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TMEM232	C9JQI7	657 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313		E7EVH7	732 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	RRH	O14718	337 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	CREB3	O43889	395 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	PROP1	O75360	226 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	SLC3A2	P08195	630 aa	Known RBP	4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	CHRM5	P08912	532 aa	Predicted RBP	4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TBC1D3H	P0C7X1	549 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	RXRA	P19793	462 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	ADD2	P35612	726 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	FOXL2	P58012	376 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	RBM6	P78332	1123 aa	Known RBP	4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	BIRC3	Q13489	604 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TMEM95	Q3KNT9	176 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	CERKL	Q49MI3	558 aa	Predicted RBP	4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TBC1D3G	Q6DHY5	549 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TBC1D3C	Q6IPX1	549 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	WDR93	Q6P2C0	686 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	RFX8	Q6ZV50	586 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	C2CD5	Q86YS7	1000 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	LAS2	Q8IYD9	372 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	CPXCR1	Q8N123	301 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313		Q8N9P0	234 aa	Predicted RBP	4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	OR6Y1	Q8NGX8	325 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	ASB12	Q8WXK4	309 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	THAP4	Q8WY91	577 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	RNF26	Q9BY78	433 aa	Predicted RBP	4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	ABHD16B	Q9H3Z7	469 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	ARL8B	Q9NVJ2	186 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	GAR1	Q9NY12	217 aa	Known RBP	4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	NDUFAF4	Q9P032	175 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	SPATA31A1	Q5TZJ5	1347 aa		4.6	□□□□□ -1.67
PTPN12-210	ENST00000464313	WDR91	A4D1P6	747 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	PRRT4	C9JH25	899 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	SFPQ	P23246	707 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	IDUA	P35475	653 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	RCAN1	P53805	252 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	ARL4C	P56559	192 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	SLC37A1	P57057	533 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	TUBA4A	P68366	448 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	SHC2	P98077	582 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	PPFIA1	Q13136	1202 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	RAPGEF1	Q13905	1077 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	C4orf46	Q504U0	113 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	DGAT2L7P	Q6IED9	249 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	KRTAP5-1	Q6L8H4	278 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	HASPIN	Q8TF76	798 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	DPF1	Q92782	380 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	GCC1	Q96CN9	775 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	C5orf34	Q96MH7	638 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	SH2D3A	Q9BRG2	576 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	MLXIPL	Q9NP71	852 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	G6PC2	Q9NQR9	355 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	PDGFC	Q9NRA1	345 aa		4.59	□□□□□ -1.67
PTPN12-210	ENST00000464313	TTC34	A8MYJ7	566 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	EIF3F	O00303	357 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	ALDOA	P04075	364 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	MPG	P29372	298 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	HOXD12	P35452	270 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	AARS	P49588	968 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	ZNF84	P51523	738 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	RBM5	P52756	815 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	YPEL5	P62699	121 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	TLE3	Q04726	772 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	DMWD	Q09019	674 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	SMAD1	Q15797	465 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	ADCK5	Q3MIX3	580 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	ANKRD45	Q5TZF3	282 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	ZNF354C	Q86Y25	554 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	HERC6	Q8IVU3	1022 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	C8orf58	Q8NAV2	365 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	SEMA6D	Q8NFY4	1073 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	SPPL3	Q8TCT6	385 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	DDB2	Q92466	427 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	CELF1	Q92879	486 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	KRTAP2-2	Q9BYT5	123 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	RMI1	Q9H9A7	625 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	CHODL	Q9H9P2	273 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms