RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 LRRC72A6NJI9 287 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 PDXKO00764 312 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 YKT6O15498 198 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 ZBED1O96006 694 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 CD38P28907 300 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 GCLMP48507 274 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 ARRB1P49407 418 aaPredicted RBP13.85□□□□□ -0.19
MRPL55-224ENST00000464148 ACADVLP49748 655 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 GALCP54803 685 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 ST8SIA6P61647 398 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 RTP5Q14D33 572 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 C1orf220Q5T0J3 134 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 ADGRF1Q5T601 910 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 NCEH1Q6PIU2 408 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 ZC3H3Q8IXZ2 948 aaKnown RBP13.85□□□□□ -0.19
MRPL55-224ENST00000464148 GRAMD1CQ8IYS0 662 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 CEP57L1Q8IYX8 460 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.85□□□□□ -0.19
MRPL55-224ENST00000464148 SAP25Q8TEE9 199 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 TMEM174Q8WUU8 243 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 NDRG1Q92597 394 aaKnown RBP13.85□□□□□ -0.19
MRPL55-224ENST00000464148 OMDQ99983 421 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 ULBP1Q9BZM6 244 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 RSPH9Q9H1X1 276 aaPredicted RBP13.85□□□□□ -0.19
MRPL55-224ENST00000464148 KCTD10Q9H3F6 313 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 MTG2Q9H4K7 406 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 FOXD4L1Q9NU39 408 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 FAM13BQ9NYF5 915 aa13.85□□□□□ -0.19
MRPL55-224ENST00000464148 HBS1LQ9Y450 684 aaKnown RBP13.85□□□□□ -0.19
MRPL55-224ENST00000464148 TEX51A0A1B0GUA7 166 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 CALUO43852 315 aaPredicted RBP13.84□□□□□ -0.19
MRPL55-224ENST00000464148 RNASEH2AO75792 299 aaKnown RBP13.84□□□□□ -0.19
MRPL55-224ENST00000464148 YEATS4O95619 227 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 WNT1P04628 370 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 SLFN14P0C7P3 912 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 TRIM49P0CI25 452 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 TRIM49CP0CI26 452 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 PDIA4P13667 645 aaKnown RBP13.84□□□□□ -0.19
MRPL55-224ENST00000464148 CD70P32970 193 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 ACTN2P35609 894 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 CCDC173Q0VFZ6 552 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 SHBQ15464 509 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 RAB41Q5JT25 222 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 FBXL19Q6PCT2 694 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 KIAA0907Q7Z7F0 614 aaPredicted RBP13.84□□□□□ -0.19
MRPL55-224ENST00000464148 KIAA0895Q8NCT3 520 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 SNIP1Q8TAD8 396 aaKnown RBP13.84□□□□□ -0.19
MRPL55-224ENST00000464148 EDEM1Q92611 657 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 FGF11Q92914 225 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 TMEM176AQ96HP8 235 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 SFMBT1Q9UHJ3 866 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 ZNF462Q96JM2 2506 aa13.84□□□□□ -0.19
MRPL55-224ENST00000464148 ATMQ13315 3056 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 A0A1W2PP55 124 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 MID1O15344 667 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 BRINP1O60477 761 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 TBL1XO60907 577 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 LATS1O95835 1130 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 KRT13P13646 458 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 SGSHP51688 502 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 CXADRP78310 365 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 CFHR1Q03591 330 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 PPP3CAQ08209 521 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 CST6Q15828 149 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 SLC45A4Q5BKX6 768 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 PM20D1Q6GTS8 502 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 INTS8Q75QN2 995 aaKnown RBP13.83□□□□□ -0.2
MRPL55-224ENST00000464148 DHX40Q8IX18 779 aaKnown RBP13.83□□□□□ -0.2
MRPL55-224ENST00000464148 TTC39CQ8N584 583 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 ANKRD52Q8NB46 1076 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 SLC4A11Q8NBS3 891 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 OR2T34Q8NGX1 318 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 WFDC5Q8TCV5 224 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 TSC1Q92574 1164 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 SERAC1Q96JX3 654 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 NEUROG2Q9H2A3 272 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 EBF2Q9HAK2 575 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 LRRC4Q9HBW1 653 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 SERGEFQ9UGK8 458 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 STOML2Q9UJZ1 356 aa13.83□□□□□ -0.2
MRPL55-224ENST00000464148 MYLKQ15746 1914 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 CAPN8A6NHC0 703 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 MAPK13O15264 365 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 MSI1O43347 362 aaKnown RBP13.82□□□□□ -0.2
MRPL55-224ENST00000464148 KLRC4O43908 158 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 SIN3BO75182 1162 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 GLDCP23378 1020 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 EPHA8P29322 1005 aaPredicted RBP13.82□□□□□ -0.2
MRPL55-224ENST00000464148 ME1P48163 572 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 RAD23BP54727 409 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 BNIP3Q12983 259 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 ILKQ13418 452 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 KMT5BQ4FZB7 885 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 BSPRYQ5W0U4 402 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 RFWD3Q6PCD5 774 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 MMAAQ8IVH4 418 aaKnown RBP13.82□□□□□ -0.2
MRPL55-224ENST00000464148 MFN1Q8IWA4 741 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 ZNF557Q8N988 423 aaPredicted RBP13.82□□□□□ -0.2
MRPL55-224ENST00000464148 CISHQ9NSE2 258 aa13.82□□□□□ -0.2
MRPL55-224ENST00000464148 STIM2Q9P246 746 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms