RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 METTL5Q9NRN9 209 aaKnown RBP13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 SEPT11Q9NVA2 429 aaKnown RBP13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 ELOVL2Q9NXB9 296 aa13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 GGA2Q9UJY4 613 aa13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 GOLGA6L7A0A1B0GV03 622 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 ANKRD62A6NC57 917 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 SGK1O00141 431 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 TRIM24O15164 1050 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 GFRA3O60609 400 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 PABPC1P11940 636 aaKnown RBP13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 FLT3P36888 993 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 RNASE9P60153 205 aaKnown RBP13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 KLHL30Q0D2K2 578 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 NME3Q13232 169 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 BYSLQ13895 437 aaKnown RBP13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 GEN1Q17RS7 908 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 EGFLAMQ63HQ2 1017 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 STRADAQ7RTN6 431 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 MFN1Q8IWA4 741 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 LGI2Q8N0V4 545 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 CCDC33Q8N5R6 958 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 TRIM11Q96F44 468 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 C1orf74Q96LT6 269 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 HHIPQ96QV1 700 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 TBCBQ99426 244 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 WDCPQ9H6R7 721 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 RAB23Q9ULC3 237 aa13.52□□□□□ -0.25
R3HDM1-213ENST00000463230 SIGLEC16A6NMB1 481 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 ZBTB24O43167 697 aaPredicted RBP13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 ADAM23O75077 832 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 LUC7L3O95232 432 aaKnown RBP13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 ASLP04424 464 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 KRT3P12035 628 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 HOXB2P14652 356 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 DESP17661 470 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 SDC4P31431 198 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 EMC10Q5UCC4 262 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 RAP1GAP2Q684P5 730 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 CHST9Q7L1S5 443 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 VPS36Q86VN1 386 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 KDM1BQ8NB78 822 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 SUMF1Q8NBK3 374 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 LMLNQ96KR4 655 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 HAPLN3Q96S86 360 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 PPP1R9BQ96SB3 815 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 SELENOOQ9BVL4 669 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 HAUS4Q9H6D7 363 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 RETREG1Q9H6L5 497 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 PIGVQ9NUD9 493 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 HCN2Q9UL51 889 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 LUC7L2Q9Y383 392 aaKnown RBP13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 PLXND1Q9Y4D7 1925 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 PIEZO1Q92508 2521 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 MYO18AQ92614 2054 aaKnown RBP13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 A0A1B0GVM2 712 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 TCAF2A6NFQ2 919 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 C2CD4BA6NLJ0 364 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 ATP5BP06576 529 aaKnown RBP13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 HLA-FP30511 346 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 SGSHP51688 502 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 DMWDQ09019 674 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 CDH18Q13634 790 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 LAIR1Q6GTX8 287 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 DNAJC24Q6P3W2 148 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 DRC7Q8IY82 874 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 CHPFQ8IZ52 775 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 MCOLN2Q8IZK6 566 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 OLIG1Q8TAK6 271 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 LOXL4Q96JB6 756 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 XPO4Q9C0E2 1151 aaKnown RBP13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 FBRSQ9HAH7 460 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 KIAA1522Q9P206 1035 aaPredicted RBP13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 CLEC4EQ9ULY5 219 aa13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 SMG5Q9UPR3 1016 aaKnown RBP13.51□□□□□ -0.25
R3HDM1-213ENST00000463230 SYNJ2BP-COX16A0A087WUM0 186 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 TCRBV5S1A1TA0A578 114 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 PAGE1O75459 146 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 MOCS3O95396 460 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 SERPING1P05155 500 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 MYBL1P10243 752 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 PDGFRAP16234 1089 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 RPS24P62847 133 aaKnown RBP13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 STARD3Q14849 445 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 USP39Q53GS9 565 aaKnown RBP13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 HEATR6Q6AI08 1181 aaKnown RBP13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 TRNP1Q6NT89 227 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 TMEM92Q6UXU6 159 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 ALYREFQ86V81 257 aaKnown RBP13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 RXFP2Q8WXD0 754 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 CENPIQ92674 756 aaPredicted RBP13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 TTC17Q96AE7 1141 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 TKTL2Q9H0I9 626 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 ABCB8Q9NUT2 735 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 COX16Q9P0S2 106 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 XPO7Q9UIA9 1087 aaKnown RBP13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 STON1Q9Y6Q2 735 aa13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 MUC22E2RYF6 1773 aaPredicted RBP13.5□□□□□ -0.25
R3HDM1-213ENST00000463230 HRO43593 1189 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 RPP40O75818 363 aaKnown RBP13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 GPD1P21695 349 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms