RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 GON4LQ3T8J9 2241 aa13.58□□□□□ -0.24
HDAC1-203ENST00000463172 CKAP5Q14008 2032 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 PI4KAP42356 2102 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 GOLGA6L7A0A1B0GV03 622 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 SMTNL1A8MU46 457 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 KCNU1A8MYU2 1149 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 SLC30A4O14863 429 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 F9P00740 461 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 IGLV3-25P01717 112 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 DLDP09622 509 aaKnown RBP13.57□□□□□ -0.24
HDAC1-203ENST00000463172 CCDC172P0C7W6 258 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 BCKDHBP21953 392 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 HLA-FP30511 346 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 OXTRP30559 389 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 CDH5P33151 784 aaPredicted RBP13.57□□□□□ -0.24
HDAC1-203ENST00000463172 HOXD12P35452 270 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 SCNN1AP37088 669 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 STAT1P42224 750 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 IL12RB1P42701 662 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 COPB1P53618 953 aaKnown RBP13.57□□□□□ -0.24
HDAC1-203ENST00000463172 LIMK1P53667 647 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 POLR2FP61218 127 aaKnown RBP13.57□□□□□ -0.24
HDAC1-203ENST00000463172 SFSWAPQ12872 951 aaKnown RBP13.57□□□□□ -0.24
HDAC1-203ENST00000463172 ENPP2Q13822 863 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 SYCP1Q15431 976 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 ZC3H12AQ5D1E8 599 aaKnown RBP13.57□□□□□ -0.24
HDAC1-203ENST00000463172 MS4A13Q5J8X5 152 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 SYCP2LQ5T4T6 812 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 ACBD5Q5T8D3 534 aaPredicted RBP13.57□□□□□ -0.24
HDAC1-203ENST00000463172 MBLAC2Q68D91 279 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 KIAA1211LQ6NV74 962 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 OLFML1Q6UWY5 402 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 METTL3Q86U44 580 aaKnown RBP13.57□□□□□ -0.24
HDAC1-203ENST00000463172 TMEFF1Q8IYR6 380 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 LGI2Q8N0V4 545 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 CARNMT1Q8N4J0 409 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 ZNF397Q8NF99 534 aaPredicted RBP13.57□□□□□ -0.24
HDAC1-203ENST00000463172 FIBINQ8TAL6 211 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 CEP76Q8TAP6 659 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 PIGKQ92643 395 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 FAM207AQ9NSI2 230 aaPredicted RBP13.57□□□□□ -0.24
HDAC1-203ENST00000463172 KIAA1522Q9P206 1035 aaPredicted RBP13.57□□□□□ -0.24
HDAC1-203ENST00000463172 CLEC4EQ9ULY5 219 aa13.57□□□□□ -0.24
HDAC1-203ENST00000463172 SYNJ2BP-COX16A0A087WUM0 186 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 LGALS16A8MUM7 142 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 WASH3PC4AMC7 463 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 GRAP2O75791 330 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 LUC7L3O95232 432 aaKnown RBP13.56□□□□□ -0.24
HDAC1-203ENST00000463172 ERBB2P04626 1255 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 PNMA6AP0CW24 399 aaPredicted RBP13.56□□□□□ -0.24
HDAC1-203ENST00000463172 PTMSP20962 102 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 TACR2P21452 398 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 SLC6A4P31645 630 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 NNMTP40261 264 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 MATKP42679 507 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 ATXN1P54253 815 aaKnown RBP13.56□□□□□ -0.24
HDAC1-203ENST00000463172 UBXN1Q04323 297 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 TYRO3Q06418 890 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 LMAN2Q12907 356 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 NME3Q13232 169 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 SLC12A1Q13621 1099 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 SF3A2Q15428 464 aaKnown RBP13.56□□□□□ -0.24
HDAC1-203ENST00000463172 CCDC6Q16204 474 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 FUT11Q495W5 492 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 PTPN20Q4JDL3 420 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 FAM102AQ5T9C2 384 aaPredicted RBP13.56□□□□□ -0.24
HDAC1-203ENST00000463172 TAF3Q5VWG9 929 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 RNF219Q5W0B1 726 aaPredicted RBP13.56□□□□□ -0.24
HDAC1-203ENST00000463172 RAP1GAP2Q684P5 730 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 RNF43Q68DV7 783 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 NADSYN1Q6IA69 706 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 LRSAM1Q6UWE0 723 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 TRIM72Q6ZMU5 477 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 SYT12Q8IV01 421 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 OR2T3Q8NH03 318 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 FOXJ1Q92949 421 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 SIPA1Q96FS4 1042 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 MRGPRX1Q96LB2 322 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 NUSAP1Q9BXS6 441 aaKnown RBP13.56□□□□□ -0.24
HDAC1-203ENST00000463172 NUCKS1Q9H1E3 243 aaKnown RBP13.56□□□□□ -0.24
HDAC1-203ENST00000463172 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.56□□□□□ -0.249e-6■□□□□ 9.2
HDAC1-203ENST00000463172 COX16Q9P0S2 106 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 CYP8B1Q9UNU6 501 aa13.56□□□□□ -0.24
HDAC1-203ENST00000463172 IGHV1OR15-9A0A0B4J2B8 117 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 M0QYT0 321 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 RNASEH1O60930 286 aaKnown RBP13.55□□□□□ -0.24
HDAC1-203ENST00000463172 GFPT2O94808 682 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 CD6P30203 668 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 SOX5P35711 763 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 GABRB2P47870 512 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 RNASE9P60153 205 aaKnown RBP13.55□□□□□ -0.24
HDAC1-203ENST00000463172 RPS24P62847 133 aaKnown RBP13.55□□□□□ -0.24
HDAC1-203ENST00000463172 TAF5Q15542 800 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 FILIP1LQ4L180 1135 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 WDR45BQ5MNZ6 344 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 BRMS1LQ5PSV4 323 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 DPY19L2P1Q6NXN4 242 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 ARMCX6Q7L4S7 300 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 KIAA0907Q7Z7F0 614 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms