RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 EDRF1Q3B7T1 1238 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 MBNL2Q5VZF2 373 aaKnown RBP7.93□□□□□ -1.14
UBE4B-204ENST00000462658 LRRC55Q6ZSA7 311 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 HAUS6Q7Z4H7 955 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 ADGRE4PQ86SQ3 457 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 CD99L2Q8TCZ2 262 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 RABGGTAQ92696 567 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 TMEM143Q96AN5 459 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 IFT74Q96LB3 600 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 CNOT6LQ96LI5 555 aaKnown RBP7.93□□□□□ -1.14
UBE4B-204ENST00000462658 ACCSQ96QU6 501 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 RBM15Q96T37 977 aaKnown RBP eCLIP7.93□□□□□ -1.14
UBE4B-204ENST00000462658 C16orf70Q9BSU1 422 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 POLR3FQ9H1D9 316 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-204ENST00000462658 VPS16Q9H269 839 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 RNPEPQ9H4A4 650 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 ST6GALNAC4Q9H4F1 302 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 TMEM206Q9H813 350 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 KMT5AQ9NQR1 393 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 TLR9Q9NR96 1032 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 TAB2Q9NYJ8 693 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 NRBP1Q9UHY1 535 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 Q9Y3F1 56 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 MCM3APO60318 1980 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 KLHL33A6NCF5 533 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 H0YCG3 227 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 CLIC2O15247 247 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 TEX33O43247 280 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 TGFB1I1O43294 461 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 GNA14O95837 355 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 ITGB3P05106 788 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 ZNF286BP0CG31 522 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 AKR1A1P14550 325 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 INSRRP14616 1297 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 CCND1P24385 295 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 CTSSP25774 331 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 ARL2P36404 184 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 SLC5A3P53794 718 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 DUSP8Q13202 625 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 PPP2R5AQ15172 486 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 PLEKHG6Q3KR16 790 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 HS1BP3Q53T59 392 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 ZNF484Q5JVG2 852 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 TCTN3Q6NUS6 607 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 CCDC186Q7Z3E2 898 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 TLK2Q86UE8 772 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 VSTM4Q8IW00 320 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 ZC3H3Q8IXZ2 948 aaKnown RBP7.92□□□□□ -1.14
UBE4B-204ENST00000462658 SYCP3Q8IZU3 236 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 TMEM161BQ8NDZ6 487 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 TRPV1Q8NER1 839 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 GOLGA5Q8TBA6 731 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 RIN2Q8WYP3 895 aaPredicted RBP7.92□□□□□ -1.14
UBE4B-204ENST00000462658 TRIB2Q92519 343 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 FATE1Q969F0 183 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 HVCN1Q96D96 273 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 TMEM176AQ96HP8 235 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 OR14A2Q96R54 314 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 JPH2Q9BR39 696 aaPredicted RBP7.92□□□□□ -1.14
UBE4B-204ENST00000462658 TUBGCP2Q9BSJ2 902 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 INTS13Q9NVM9 706 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 RAPGEFL1Q9UHV5 662 aa7.92□□□□□ -1.14
UBE4B-204ENST00000462658 ZNF215Q9UL58 517 aaPredicted RBP7.92□□□□□ -1.14
UBE4B-204ENST00000462658 LOXHD1Q8IVV2 1947 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 IGKV6-21A0A0C4DH24 114 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 DENND3A2RUS2 1198 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 PES1O00541 588 aaKnown RBP7.91□□□□□ -1.14
UBE4B-204ENST00000462658 MAGEB2O15479 319 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 FOXS1O43638 330 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 DUSP11O75319 330 aaKnown RBP7.91□□□□□ -1.14
UBE4B-204ENST00000462658 NR3C1P04150 777 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 JUNP05412 331 aaKnown RBP7.91□□□□□ -1.14
UBE4B-204ENST00000462658 CYBAP13498 195 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 C5AR1P21730 350 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 GLRA2P23416 452 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 NR2F2P24468 414 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 KLRC1P26715 233 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 ADSLP30566 484 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-204ENST00000462658 ABCD1P33897 745 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 NAMPTP43490 491 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 CPT1AP50416 773 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 NEK2P51955 445 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 UBXN1Q04323 297 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 PLP2Q04941 152 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 ARHGEF6Q15052 776 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 NFIL3Q16649 462 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 CCDC40Q4G0X9 1142 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 EFCAB12Q6NXP0 572 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 CTU1Q7Z7A3 348 aaKnown RBP7.91□□□□□ -1.14
UBE4B-204ENST00000462658 ZBTB46Q86UZ6 589 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 CIR1Q86X95 450 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-204ENST00000462658 DEPTORQ8TB45 409 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 TRAPPC12Q8WVT3 735 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 TCP11Q8WWU5 503 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 ERO1AQ96HE7 468 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 TEKT5Q96M29 485 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 KIFC3Q9BVG8 833 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 IKZF4Q9H2S9 585 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 AGPAT3Q9NRZ7 376 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 CGNQ9P2M7 1197 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms