RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 WDR45BQ5MNZ6 344 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 SYCP2LQ5T4T6 812 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 DCAF12L1Q5VU92 463 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 CDKAL1Q5VV42 579 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 SDE2Q6IQ49 451 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 TRIM65Q6PJ69 517 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 CCNI2Q6ZMN8 369 aaPredicted RBP8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 RRAGAQ7L523 313 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 BHLHA9Q7RTU4 235 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 ANKS1BQ7Z6G8 1248 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 SLCO6A1Q86UG4 719 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 CACUL1Q86Y37 369 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 FAM217AQ8IXS0 508 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 RGL4Q8IZJ4 473 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 ENOX1Q8TC92 643 aaKnown RBP8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 SORCS1Q8WY21 1168 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 TFAP2BQ92481 460 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 FOXJ1Q92949 421 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 HEXIM2Q96MH2 286 aaKnown RBP8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 GPR174Q9BXC1 333 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 HSD3B7Q9H2F3 369 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 ITM2CQ9NQX7 267 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 CLIC5Q9NZA1 410 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 NAGPAQ9UK23 515 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 TSPAN16Q9UKR8 245 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 CNTN6Q9UQ52 1028 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 PCDHB4Q9Y5E5 795 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 BECN2A8MW95 431 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 NPC1O15118 1278 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 HMBSP08397 361 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 PAEPP09466 180 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 ZNF883P0CG24 379 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 VDRP11473 427 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 GNSP15586 552 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 BRD2P25440 801 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 PON1P27169 355 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 CORO1AP31146 461 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 YWHAEP62258 255 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 TYRO3Q06418 890 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 EFEMP1Q12805 493 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 KCNJ12Q14500 433 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 ZNF234Q14588 700 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 STARD3Q14849 445 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 NCAPHQ15003 741 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 STX1AQ16623 288 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 TPD52L1Q16890 204 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 SGO2Q562F6 1265 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 TCP11X2Q5H9J9 407 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 TMEM270Q6UE05 265 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 GBP6Q6ZN66 633 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 DBX2Q6ZNG2 339 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 TMPRSS6Q8IU80 811 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 FAM114A1Q8IWE2 563 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 CPXM2Q8N436 756 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 ANKRD52Q8NB46 1076 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 CADM4Q8NFZ8 388 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 MDM1Q8TC05 714 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 TUBGCP2Q9BSJ2 902 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 FUCA2Q9BTY2 467 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 ZDHHC5Q9C0B5 715 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 ANO10Q9NW15 660 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 RASAL2Q9UJF2 1139 aa8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 AGO1Q9UL18 857 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-210ENST00000462553 ZNF462Q96JM2 2506 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 METTL12A8MUP2 240 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 XPO1O14980 1071 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 BCAT2O15382 392 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 ZBTB24O43167 697 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 RALAP11233 206 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 HLA-EP13747 358 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 PRKCSHP14314 528 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 CD19P15391 556 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 ZNF18P17022 549 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 TRIM21P19474 475 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 HOXD9P28356 352 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 BCAT1P54687 386 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 PDE4CQ08493 712 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 BST2Q10589 180 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 KCNMA1Q12791 1236 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 CETN1Q12798 172 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 EIF4HQ15056 248 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 KRT31Q15323 416 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 EXOC3L4Q17RC7 722 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 VWA3BQ502W6 1294 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 SOWAHCQ53LP3 525 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 CAVIN1Q6NZI2 390 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 ADGRD1Q6QNK2 874 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 C19orf48Q6RUI8 117 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 LCLAT1Q6UWP7 414 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 APTXQ7Z2E3 356 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 TADA2BQ86TJ2 420 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 PIGZQ86VD9 579 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 DENND1CQ8IV53 801 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 SHC3Q92529 594 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 SIPA1Q96FS4 1042 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 UBXN6Q9BZV1 441 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 MIR1-1HGQ9H1L0 117 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 NDST4Q9H3R1 872 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 C6orf106Q9H6K1 298 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 GAREM1Q9H706 876 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms