RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 AGAP3Q96P47 875 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 PPP1R2P1Q96PQ5 205 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 PAIP2Q9BPZ3 127 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 FSD1LQ9BXM9 530 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 CDC42EP4Q9H3Q1 356 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 COMMD8Q9NX08 183 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 MARCH5Q9NX47 278 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 CLIC5Q9NZA1 410 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 DPP7Q9UHL4 492 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 NOVA2Q9UNW9 492 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 RWDD3Q9Y3V2 267 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 MRPL42Q9Y6G3 142 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 C3orf70A6NLC5 250 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF487B1APH4 448 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 MAP2K7O14733 419 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 PSMD3O43242 534 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 MFSD11O43934 449 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 B4GALT3O60512 393 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 RAMP2O60895 175 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 FGF18O76093 207 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 LRIG2O94898 1065 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 NR1D1P20393 614 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 CXCR3P49682 368 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 SESN2P58004 480 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF177Q13360 481 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TMED2Q15363 201 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TRIP4Q15650 581 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ACBD5Q5T8D3 534 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 PLPP4Q5VZY2 271 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 RAP1GAP2Q684P5 730 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 PM20D1Q6GTS8 502 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TIGD7Q6NT04 549 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TRNP1Q6NT89 227 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 BEND5Q7L4P6 421 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TMCO2Q7Z6W1 182 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 PRUNE1Q86TP1 453 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ARFGAP1Q8N6T3 406 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF461Q8TAF7 563 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 AUTS2Q8WXX7 1259 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ART4Q93070 314 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 BTN2A3PQ96KV6 586 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ATP6V1G3Q96LB4 118 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TSNARE1Q96NA8 513 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 HERPUD2Q9BSE4 406 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 MCOLN1Q9GZU1 580 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 FAM107BQ9H098 131 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 SEMA4AQ9H3S1 761 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TRHDEQ9UKU6 1024 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 CHMP2BQ9UQN3 213 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 RAD54BQ9Y620 910 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 SCN1AP35498 2009 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 BCLAF3A2AJT9 711 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 AP3B1O00203 1094 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 EIF3HO15372 352 aaKnown RBP eCLIP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 XYLBO75191 536 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 CDH16O75309 829 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 PPFIA2O75334 1257 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 SPAG6O75602 509 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TTC4O95801 387 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 CYBBP04839 570 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 EN2P19622 333 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 STX2P32856 288 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TWF1Q12792 350 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 SIX1Q15475 284 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 OASLQ15646 514 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 RAB6CQ53S08 254 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 RAB41Q5JT25 222 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 IL31Q6EBC2 164 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 EP400NLQ6ZTU2 488 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 LGI2Q8N0V4 545 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TTC9BQ8N6N2 239 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 CENPIQ92674 756 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 CASP10Q92851 521 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 QKIQ96PU8 341 aaKnown RBP eCLIP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 HAPLN3Q96S86 360 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 VAT1Q99536 393 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 LGMNQ99538 433 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 RAD9AQ99638 391 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 HERC2P3Q9BVR0 1158 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 CEP41Q9BYV8 373 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 UBE2OQ9C0C9 1292 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ZYG11BQ9C0D3 744 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 RAB6CQ9H0N0 254 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ATXN3LQ9H3M9 355 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ASAH2Q9NR71 780 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 GRHL1Q9NZI5 618 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 DTLQ9NZJ0 730 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ZC3H7BQ9UGR2 993 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TBK1Q9UHD2 729 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 HBS1LQ9Y450 684 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 WDR27A2RRH5 827 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 CHADO15335 359 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ANXA9O76027 345 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 GJB5O95377 273 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SPATA31D3P0C874 917 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 HDCP19113 662 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 AVPR1AP37288 418 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ETFBP38117 255 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 MAGOHP61326 146 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms