RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 POLR3CQ9BUI4 534 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 G6PC3Q9BUM1 346 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 DPH1Q9BZG8 443 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 IPPKQ9H8X2 491 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 EMC7Q9NPA0 242 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 HPS4Q9NQG7 708 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 ZSWIM5Q9P217 1185 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 SUCLA2Q9P2R7 463 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 CACNG4Q9UBN1 327 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 FTSJ1Q9UET6 329 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 SEC63Q9UGP8 760 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 MAFFQ9ULX9 164 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 TBX20Q9UMR3 447 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 PCDHA6Q9UN73 950 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 HES2Q9Y543 173 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 PCDHGA1Q9Y5H4 931 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 PCDHA10Q9Y5I2 948 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 ZFC3H1O60293 1989 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 PHLPP2Q6ZVD8 1323 aa4.39□□□□□ -1.71
ECHDC1-211ENST00000460558 TDRD6O60522 2096 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 A0A1B0GTW7 788 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 E2F8A0AVK6 867 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 ESYT2A0FGR8 921 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 CCDC66A2RUB6 948 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 PRR19A6NJB7 356 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 H7BY64 318 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 ZNF561-AS1K7EIQ3 104 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 K7ENP7 123 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 GSTA4O15217 222 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 AKAP10O43572 662 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 PRKD3O94806 890 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 SEC24AO95486 1093 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 PRAMEF12O95522 483 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 FGF19O95750 216 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 C1SP09871 688 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 SMARCA1P28370 1054 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 AXLP30530 894 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 GJA4P35212 333 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 INHBCP55103 352 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 ARPP19P56211 112 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 TBX4P57082 545 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 MRPS21P82921 87 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 TMPRSS15P98073 1019 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 OCRLQ01968 901 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 CYP4A11Q02928 519 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 PLD1Q13393 1074 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 PDGFRLQ15198 375 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 UBE2SQ16763 222 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 HLA-BQ31612 363 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 HSF5Q4G112 596 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 HES3Q5TGS1 186 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 NAIF1Q69YI7 327 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 TRIM68Q6AZZ1 485 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 INO80CQ6PI98 192 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 USP49Q70CQ1 688 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 NIPA1Q7RTP0 329 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 ZDHHC13Q8IUH4 622 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 SLC41A1Q8IVJ1 513 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 TRMT2AQ8IZ69 625 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 FAM9BQ8IZU0 186 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 PLD6Q8N2A8 252 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 NXPE1Q8N323 547 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 EXD3Q8N9H8 876 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 SPATA20Q8TB22 786 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 COG1Q8WTW3 980 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 MOCOSQ96EN8 888 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 RRP36Q96EU6 259 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 HIC2Q96JB3 615 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 JPH2Q9BR39 696 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 CDADC1Q9BWV3 514 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 OSBPL1AQ9BXW6 950 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 EIF2AQ9BY44 585 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 CDH19Q9H159 772 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 NXF3Q9H4D5 531 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 IL21RQ9HBE5 538 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 IFT122Q9HBG6 1241 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 TBC1D22BQ9NU19 505 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 PPARGC1AQ9UBK2 798 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 TRHDEQ9UKU6 1024 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 CBLCQ9ULV8 474 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 BTBD3Q9Y2F9 522 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 TIMM13Q9Y5L4 95 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 X6R8D5 127 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 DIDO1Q9BTC0 2240 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 CKAP5Q14008 2032 aa4.38□□□□□ -1.71
ECHDC1-211ENST00000460558 NIPBLQ6KC79 2804 aaeCLIP4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 IGKV6-21A0A0C4DH24 114 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 TCRBV21S2A2A0A5A6 115 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 FAM181BA6NEQ2 426 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 H7C4K7 107 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 TMEM189-UBE2V1I3L0A0 370 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 GAS7O60861 476 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 NDUFS2O75306 463 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 PPFIA2O75334 1257 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 ZNF217O75362 1048 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 ULK1O75385 1050 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 RECQL4O94761 1208 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 B3GAT3O94766 335 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 FBXO21O94952 628 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 THP07101 528 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms