RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 FAM169AQ9Y6X4 670 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 MEIS3P2A8K0S8 358 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 CLDN5O00501 218 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 CSF2RAP15509 400 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 GOT1P17174 413 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 CNTFP26441 200 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 SEC24CP53992 1094 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 TPI1P60174 286 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 YWHAHQ04917 246 aaPredicted RBP14.54□□□□□ -0.08
ERCC3-205ENST00000460485 SPARCL1Q14515 664 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 FASTKD3Q14CZ7 662 aaKnown RBP14.54□□□□□ -0.08
ERCC3-205ENST00000460485 FNBP1LQ5T0N5 605 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 UBAP2Q5T6F2 1119 aaKnown RBP14.54□□□□□ -0.08
ERCC3-205ENST00000460485 KIAA0319Q5VV43 1072 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 C3orf62Q6ZUJ4 267 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 SRRM1Q8IYB3 904 aaKnown RBP14.54□□□□□ -0.08
ERCC3-205ENST00000460485 ZMIZ2Q8NF64 920 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 SLC7A14Q8TBB6 771 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 MTBPQ96DY7 904 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 CABS1Q96KC9 395 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 PAFAH2Q99487 392 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 LPIN3Q9BQK8 851 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 OSBPL2Q9H1P3 480 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 WDR6Q9NNW5 1121 aaKnown RBP14.54□□□□□ -0.08
ERCC3-205ENST00000460485 KCNK9Q9NPC2 374 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 ABCC13Q9NSE7 274 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 TMEM161AQ9NX61 479 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 IGSF9Q9P2J2 1179 aa14.54□□□□□ -0.08
ERCC3-205ENST00000460485 REV3LO60673 3130 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 YJEFN3A6XGL0 299 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 E7ENQ6 273 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 POC1B-GALNT4F8VUJ3 575 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 TRIM66O15016 1216 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 DCLK1O15075 740 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 FGF10O15520 208 aaPredicted RBP14.53□□□□□ -0.08
ERCC3-205ENST00000460485 BEST1O76090 585 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 CPP00450 1065 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 INHBAP08476 426 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 NCAM1P13591 858 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 TFE3P19532 575 aaPredicted RBP14.53□□□□□ -0.08
ERCC3-205ENST00000460485 GCAP28676 217 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 SERPINB9P50453 376 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 GPX6P59796 221 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 TFF2Q03403 129 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 GBE1Q04446 702 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 ELAVL2Q12926 359 aaKnown RBP14.53□□□□□ -0.08
ERCC3-205ENST00000460485 PARP6Q2NL67 630 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 RAB6CQ53S08 254 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 NOMO2Q5JPE7 1267 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 ITPRIPL1Q6GPH6 555 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 SPATA2LQ8IUW3 424 aaPredicted RBP14.53□□□□□ -0.08
ERCC3-205ENST00000460485 LZTR1Q8N653 840 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 GBP7Q8N8V2 638 aaPredicted RBP14.53□□□□□ -0.08
ERCC3-205ENST00000460485 RNF169Q8NCN4 708 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 MDM1Q8TC05 714 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 FBF1Q8TES7 1133 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 SEC16BQ96JE7 1060 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 PWWP2AQ96N64 755 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 PRMT1Q99873 361 aaKnown RBP14.53□□□□□ -0.08
ERCC3-205ENST00000460485 RTP3Q9BQQ7 232 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 RAB6CQ9H0N0 254 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 IL23AQ9NPF7 189 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 TRMT13Q9NUP7 481 aaKnown RBP14.53□□□□□ -0.08
ERCC3-205ENST00000460485 COMMD8Q9NX08 183 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 DDIT4Q9NX09 232 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 TRHDEQ9UKU6 1024 aa14.53□□□□□ -0.08
ERCC3-205ENST00000460485 OR6C75A6NL08 312 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 GOLGA8MH3BSY2 632 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 ARVCFO00192 962 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 PITPNM1O00562 1244 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 PSMD3O43242 534 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 MFSD11O43934 449 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 KRT37O76014 449 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 OAZ2O95190 189 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 POMCP01189 267 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 APRTP07741 180 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 SLC2A3P11169 496 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 SELPP16109 830 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 PRKCHP24723 683 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 ELK3P41970 407 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 MAGEA11P43364 429 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 YWHAGP61981 247 aaKnown RBP eCLIP14.52□□□□□ -0.09
ERCC3-205ENST00000460485 NRG1Q02297 640 aaPredicted RBP14.52□□□□□ -0.09
ERCC3-205ENST00000460485 DNAJC3Q13217 504 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 ANKRD20A2Q5SQ80 823 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 ANKRD20A1Q5TYW2 823 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 ANKRD20A3Q5VUR7 823 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 NUGGCQ68CJ6 796 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 C6orf89Q6UWU4 347 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 CCDC121Q6ZUS5 278 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 PIGWQ7Z7B1 504 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 ALYREFQ86V81 257 aaKnown RBP14.52□□□□□ -0.09
ERCC3-205ENST00000460485 SLC26A11Q86WA9 606 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 LRRC49Q8IUZ0 686 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 ANKMY2Q8IV38 441 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 OTUD6BQ8N6M0 293 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 GSDMBQ8TAX9 411 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 SLC44A1Q8WWI5 657 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 HDAC11Q96DB2 347 aa14.52□□□□□ -0.09
ERCC3-205ENST00000460485 CEP295NLQ96MC4 621 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms