RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 CCDC25Q86WR0 208 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 CEP57Q86XR8 500 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 LRRC49Q8IUZ0 686 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 ZNF683Q8IZ20 524 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 CNPY4Q8N129 248 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 ATP11CQ8NB49 1132 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 ADAM32Q8TC27 787 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 MAML1Q92585 1016 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 AZIN2Q96A70 460 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 P2RY11Q96G91 374 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 C9orf72Q96LT7 481 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 CDK5RAP1Q96SZ6 601 aaKnown RBP8.3□□□□□ -1.08
SFPQ-202ENST00000460428 WDR83Q9BRX9 315 aaKnown RBP8.3□□□□□ -1.08
SFPQ-202ENST00000460428 DHRS4Q9BTZ2 278 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 CRISPLD1Q9H336 500 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 PRDM12Q9H4Q4 367 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 CNOT10Q9H9A5 744 aaKnown RBP8.3□□□□□ -1.08
SFPQ-202ENST00000460428 ETNK1Q9HBU6 452 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 XAB2Q9HCS7 855 aaKnown RBP8.3□□□□□ -1.08
SFPQ-202ENST00000460428 SAYSD1Q9NPB0 183 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 TLR8Q9NR97 1041 aaKnown RBP8.3□□□□□ -1.08
SFPQ-202ENST00000460428 RAB6BQ9NRW1 208 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 DONSONQ9NYP3 566 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 PPARGC1AQ9UBK2 798 aaKnown RBP8.3□□□□□ -1.08
SFPQ-202ENST00000460428 HCSTQ9UBK5 93 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 SLC24A2Q9UI40 661 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 XPO7Q9UIA9 1087 aaKnown RBP8.3□□□□□ -1.08
SFPQ-202ENST00000460428 NOVA2Q9UNW9 492 aaKnown RBP8.3□□□□□ -1.08
SFPQ-202ENST00000460428 ATP11BQ9Y2G3 1177 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 MFHAS1Q9Y4C4 1052 aa8.3□□□□□ -1.08
SFPQ-202ENST00000460428 CLUHO75153 1309 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 IGLV3-10A0A075B6K4 115 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 SYNJ2BP-COX16A0A087WUM0 186 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 TRIM43BA6NCK2 446 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 DRGXA6NNA5 263 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 NT5C1B-RDH14C9J2C7 533 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 RGS16O15492 202 aaPredicted RBP8.29□□□□□ -1.08
SFPQ-202ENST00000460428 CREB3O43889 395 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 LILRB3O75022 631 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 SUN1O94901 812 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 ACSL3O95573 720 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 MYCP01106 439 aaPredicted RBP8.29□□□□□ -1.08
SFPQ-202ENST00000460428 C1QAP02745 245 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 CPB1P15086 417 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 LAG3P18627 525 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 ATF6P18850 670 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 CCNCP24863 283 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 GCAP28676 217 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 ATP5DP30049 168 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 PHBP35232 272 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 MDH1P40925 334 aaKnown RBP8.29□□□□□ -1.08
SFPQ-202ENST00000460428 GARSP41250 739 aaKnown RBP8.29□□□□□ -1.08
SFPQ-202ENST00000460428 GPR15P49685 360 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 GPX6P59796 221 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 WDR5P61964 334 aaKnown RBP8.29□□□□□ -1.08
SFPQ-202ENST00000460428 PDIA2Q13087 525 aaKnown RBP8.29□□□□□ -1.08
SFPQ-202ENST00000460428 DUSP4Q13115 394 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 NR1H3Q13133 447 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 RAB33AQ14088 237 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 PSMD5Q16401 504 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 MSS51Q4VC12 460 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 ZNF534Q76KX8 674 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 CAND1Q86VP6 1230 aaKnown RBP8.29□□□□□ -1.08
SFPQ-202ENST00000460428 ZBED8Q8IZ13 594 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 VPS52Q8N1B4 723 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 TMEM199Q8N511 208 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 SH2D3CQ8N5H7 860 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 PDZD8Q8NEN9 1154 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 ZNF461Q8TAF7 563 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 CCDC110Q8TBZ0 833 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 PYROXD1Q8WU10 500 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 TRIM43Q96BQ3 446 aaPredicted RBP8.29□□□□□ -1.08
SFPQ-202ENST00000460428 TRMT2BQ96GJ1 504 aaKnown RBP8.29□□□□□ -1.08
SFPQ-202ENST00000460428 FCRL2Q96LA5 508 aaPredicted RBP8.29□□□□□ -1.08
SFPQ-202ENST00000460428 ZNF558Q96NG5 402 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 LGMNQ99538 433 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 CLSTN3Q9BQT9 956 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 CAPS2Q9BXY5 557 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 CATSPERBQ9H7T0 1116 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 RXFP1Q9HBX9 757 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 COX16Q9P0S2 106 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 RABGEF1Q9UJ41 708 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 TRHDEQ9UKU6 1024 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 HBS1LQ9Y450 684 aaKnown RBP8.29□□□□□ -1.08
SFPQ-202ENST00000460428 CDY1Q9Y6F8 540 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 PCNTO95613 3336 aa8.29□□□□□ -1.08
SFPQ-202ENST00000460428 CENPFP49454 3210 aa8.28□□□□□ -1.08
SFPQ-202ENST00000460428 SLC38A8A6NNN8 435 aa8.28□□□□□ -1.08
SFPQ-202ENST00000460428 ERI2A8K979 691 aaKnown RBP8.28□□□□□ -1.08
SFPQ-202ENST00000460428 TRDMT1O14717 391 aaKnown RBP8.28□□□□□ -1.08
SFPQ-202ENST00000460428 ADAM12O43184 909 aa8.28□□□□□ -1.08
SFPQ-202ENST00000460428 STK10O94804 968 aaKnown RBP8.28□□□□□ -1.08
SFPQ-202ENST00000460428 ATP2A2P16615 1042 aaKnown RBP8.28□□□□□ -1.08
SFPQ-202ENST00000460428 HMGA1P17096 107 aaKnown RBP8.28□□□□□ -1.08
SFPQ-202ENST00000460428 DNAJB2P25686 324 aa8.28□□□□□ -1.08
SFPQ-202ENST00000460428 PTPN3P26045 913 aa8.28□□□□□ -1.08
SFPQ-202ENST00000460428 EPHB2P29323 1055 aa8.28□□□□□ -1.08
SFPQ-202ENST00000460428 PPP3CCP48454 512 aa8.28□□□□□ -1.08
SFPQ-202ENST00000460428 IFNAR2P48551 515 aa8.28□□□□□ -1.08
SFPQ-202ENST00000460428 TUBP50607 506 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms