RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 DESI2Q9BSY9 194 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 TJP2Q9UDY2 1190 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.22■□□□□ 0.19
SDF4-204ENST00000459994 MUC22E2RYF6 1773 aaPredicted RBP16.22■□□□□ 0.19
SDF4-204ENST00000459994 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.21■□□□□ 0.19
SDF4-204ENST00000459994 PRRT4C9JH25 899 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 PIK3R2O00459 728 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 PJA2O43164 708 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 PAPSS1O43252 624 aaPredicted RBP16.21■□□□□ 0.19
SDF4-204ENST00000459994 SART1O43290 800 aaKnown RBP16.21■□□□□ 0.19
SDF4-204ENST00000459994 CCDC175P0C221 793 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 LCP1P13796 627 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 TYRP14679 529 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 VAV2P52735 878 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 YWHAGP61981 247 aaKnown RBP eCLIP16.21■□□□□ 0.19
SDF4-204ENST00000459994 LMNB2Q03252 620 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 ADIGQ0VDE8 80 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 EGFLAMQ63HQ2 1017 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 TCEAL6Q6IPX3 200 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 PLEKHA7Q6IQ23 1121 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 XYLT1Q86Y38 959 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 DNAAF5Q86Y56 855 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 CTNNBL1Q8WYA6 563 aaPredicted RBP16.21■□□□□ 0.19
SDF4-204ENST00000459994 IRGQQ8WZA9 623 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 TCEAL3Q969E4 200 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 TRIM44Q96DX7 344 aaPredicted RBP16.21■□□□□ 0.19
SDF4-204ENST00000459994 ZC3H10Q96K80 434 aaKnown RBP16.21■□□□□ 0.19
SDF4-204ENST00000459994 BBS2Q9BXC9 721 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 PACSIN1Q9BY11 444 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 DNAJC17Q9NVM6 304 aaKnown RBP16.21■□□□□ 0.19
SDF4-204ENST00000459994 CLIC5Q9NZA1 410 aa16.21■□□□□ 0.19
SDF4-204ENST00000459994 CKAP5Q14008 2032 aa16.21■□□□□ 0.18
SDF4-204ENST00000459994 TCRBV5S1A1TA0A578 114 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 TBC1D3BA6NDS4 549 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 CACNG3O60359 315 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 LRP3O75074 770 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 ZBED1O96006 694 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 CYP1A2P05177 515 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 CISD3P0C7P0 127 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 ABCB4P21439 1286 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 RRM1P23921 792 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 PI4KAP42356 2102 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 TNFRSF4P43489 277 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 DAOAP59103 153 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 SLC6A3Q01959 620 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 TCEAL1Q15170 157 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 PLA2G2CQ5R387 149 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 BTBD8Q5XKL5 378 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 OR6B2Q6IFH4 312 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 ZNF662Q6ZS27 426 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 SCUBE3Q8IX30 993 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 ZNF276Q8N554 614 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 C3orf20Q8ND61 904 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 CLEC4CQ8WTT0 213 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 ZNF653Q96CK0 615 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 THAP2Q9H0W7 228 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 ASNSD1Q9NWL6 643 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 MARK1Q9P0L2 795 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 DEC1Q9P2X7 70 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 CNOT8Q9UFF9 292 aaKnown RBP16.2■□□□□ 0.18
SDF4-204ENST00000459994 LSM7Q9UK45 103 aaKnown RBP16.2■□□□□ 0.18
SDF4-204ENST00000459994 CLEC4EQ9ULY5 219 aa16.2■□□□□ 0.18
SDF4-204ENST00000459994 YJEFN3A6XGL0 299 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 BTNL10A8MVZ5 291 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.19■□□□□ 0.18
SDF4-204ENST00000459994 E7ENQ6 273 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 GLI1P08151 1106 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 RALAP11233 206 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 CORO1AP31146 461 aaKnown RBP16.19■□□□□ 0.18
SDF4-204ENST00000459994 DEKP35659 375 aaKnown RBP16.19■□□□□ 0.18
SDF4-204ENST00000459994 PSEN1P49768 467 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 C2CD6Q53TS8 623 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 EFHC1Q5JVL4 640 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 OLFML1Q6UWY5 402 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 FAM183BPQ6ZVS7 135 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 SLC26A9Q7LBE3 791 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 KIAA1328Q86T90 577 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 ZNF513Q8N8E2 541 aaPredicted RBP16.19■□□□□ 0.18
SDF4-204ENST00000459994 EDEM1Q92611 657 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 CD248Q9HCU0 757 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 PARVAQ9NVD7 372 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 SFMBT1Q9UHJ3 866 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 MBD1Q9UIS9 605 aaPredicted RBP16.19■□□□□ 0.18
SDF4-204ENST00000459994 CDV3Q9UKY7 258 aaKnown RBP16.19■□□□□ 0.18
SDF4-204ENST00000459994 AGO1Q9UL18 857 aaKnown RBP16.19■□□□□ 0.18
SDF4-204ENST00000459994 PYCARDQ9ULZ3 195 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 PPP2R2CQ9Y2T4 447 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 SCINQ9Y6U3 715 aa16.19■□□□□ 0.18
SDF4-204ENST00000459994 NYNRINQ9P2P1 1898 aaKnown RBP16.18■□□□□ 0.18
SDF4-204ENST00000459994 A0A0A6YYK5 440 aaPredicted RBP16.18■□□□□ 0.18
SDF4-204ENST00000459994 TCRBV21S2A2A0A5A6 115 aa16.18■□□□□ 0.18
SDF4-204ENST00000459994 SLC12A8A0AV02 714 aa16.18■□□□□ 0.18
SDF4-204ENST00000459994 FAM170AA1A519 330 aa16.18■□□□□ 0.18
SDF4-204ENST00000459994 RCCD1A6NED2 376 aa16.18■□□□□ 0.18
SDF4-204ENST00000459994 SIGLEC16A6NMB1 481 aa16.18■□□□□ 0.18
SDF4-204ENST00000459994 PRR5-ARHGAP8B1AHC4 643 aa16.18■□□□□ 0.18
SDF4-204ENST00000459994 ZSCAN12O43309 604 aa16.18■□□□□ 0.18
SDF4-204ENST00000459994 GBP1P32455 592 aa16.18■□□□□ 0.18
SDF4-204ENST00000459994 MPLP40238 635 aa16.18■□□□□ 0.18
SDF4-204ENST00000459994 ARHGAP8P85298 464 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms