RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	CGN	Q9P2M7	1197 aa	Known RBP	13.75	□□□□□ -0.21
SNHG17-208	ENST00000456953	SCML1	Q9UN30	329 aa		13.75	□□□□□ -0.21
SNHG17-208	ENST00000456953	PCDHA7	Q9UN72	937 aa		13.75	□□□□□ -0.21
SNHG17-208	ENST00000456953	USP3	Q9Y6I4	520 aa		13.75	□□□□□ -0.21
SNHG17-208	ENST00000456953	FLNC	Q14315	2725 aa		13.75	□□□□□ -0.21
SNHG17-208	ENST00000456953	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	FAM47DP	A6NHR8	397 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	LRRC72	A6NJI9	287 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	EXOC3	O60645	756 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	VNN1	O95497	513 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	C4BPA	P04003	597 aa	Known RBP	13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	RPN1	P04843	607 aa	Known RBP	13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	ATP5B	P06576	529 aa	Known RBP	13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	RXRG	P48443	463 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	GALC	P54803	685 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	ZNF445	P59923	1031 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	INSM1	Q01101	510 aa	Predicted RBP	13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	FAM26F	Q5R3K3	315 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	NCEH1	Q6PIU2	408 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	CHST9	Q7L1S5	443 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	RSRC2	Q7L4I2	434 aa	Known RBP	13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	ADIPOR2	Q86V24	386 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	NELFCD	Q8IXH7	590 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	AHI1	Q8N157	1196 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	ARHGAP18	Q8N392	663 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	OXR1	Q8N573	874 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	PLEKHO2	Q8TD55	490 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	PARD3B	Q8TEW8	1205 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	TAF4B	Q92750	862 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	PLD4	Q96BZ4	506 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	HIC2	Q96JB3	615 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	ZNF578	Q96N58	590 aa	Predicted RBP	13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	SEMA4C	Q9C0C4	833 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	ERVMER34-1	Q9H9K5	563 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	ABCB8	Q9NUT2	735 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	FBXL12	Q9NXK8	326 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	FAM13B	Q9NYF5	915 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	SUN2	Q9UH99	717 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953	ADAMTS1	Q9UHI8	967 aa		13.74	□□□□□ -0.21
SNHG17-208	ENST00000456953		A0A1W2PR77	199 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	SLC12A8	A0AV02	714 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	WISP1	O95388	367 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	ACP1	P24666	158 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	ASPA	P45381	313 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	NXPH1	P58417	271 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	E2F1	Q01094	437 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	INCA1	Q0VD86	236 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	ARHGAP40	Q5TG30	622 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	PDILT	Q8N807	584 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	OR2T34	Q8NGX1	318 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	ARID3A	Q99856	593 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	EBF2	Q9HAK2	575 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	CPNE5	Q9HCH3	593 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	KBTBD4	Q9NVX7	518 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	GGA2	Q9UJY4	613 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	TPX2	Q9ULW0	747 aa	Known RBP	13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	TEX15	Q9BXT5	2789 aa		13.73	□□□□□ -0.21
SNHG17-208	ENST00000456953	C10orf142	B7Z368	130 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	TLR4	O00206	839 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	RNASEH1	O60930	286 aa	Known RBP	13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	KIF20A	O95235	890 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	ASS1	P00966	412 aa	Known RBP	13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	PABPC1	P11940	636 aa	Known RBP	13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	HARS2	P49590	506 aa	Known RBP	13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	CCR5	P51681	352 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	ASIC1	P78348	528 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	AMPD3	Q01432	767 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	LY6D	Q14210	128 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	KCNJ12	Q14500	433 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	TRIP4	Q15650	581 aa	Predicted RBP	13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	SLC45A4	Q5BKX6	768 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	MBLAC2	Q68D91	279 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	CNNM4	Q6P4Q7	775 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	KANSL1	Q7Z3B3	1105 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	DHX40	Q8IX18	779 aa	Known RBP	13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	LSMEM2	Q8N112	164 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	SNRNP27	Q8WVK2	155 aa	Known RBP	13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	NAF1	Q96HR8	494 aa	Known RBP	13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	TWNK	Q96RR1	684 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	NT5C1A	Q9BXI3	368 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	DUSP16	Q9BY84	665 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	DNAI2	Q9GZS0	605 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	SERGEF	Q9UGK8	458 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953	FZD4	Q9ULV1	537 aa		13.72	□□□□□ -0.21
SNHG17-208	ENST00000456953		A0A1W2PQ27	194 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953		A0A1W2PQ64	194 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	PYCARD-AS1	I3L0S3	204 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	WNT9A	O14904	365 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	SLC28A2	O43868	658 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	DXO	O77932	396 aa	Known RBP	13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	MT-CO3	P00414	261 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	POLR2E	P19388	210 aa	Known RBP	13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	CMA1	P23946	247 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	BNIP3	Q12983	259 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	CST6	Q15828	149 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	PROX2	Q3B8N5	592 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms