RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 BBS7Q8IWZ6 715 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 C12orf56Q8IXR9 622 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 CEP57L1Q8IYX8 460 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 FUKQ8N0W3 1084 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 FMR1NBQ8N0W7 255 aaPredicted RBP4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 TXNDC5Q8NBS9 432 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 ZMIZ2Q8NF64 920 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 MDGA1Q8NFP4 955 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 TSTD1Q8NFU3 115 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 NKD1Q969G9 470 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 SYAP1Q96A49 352 aaPredicted RBP4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 JAKMIP2Q96AA8 810 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 EEF2KMTQ96G04 330 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 LOXL4Q96JB6 756 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 ZC3H10Q96K80 434 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 SLITRK1Q96PX8 696 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 PNKPQ96T60 521 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 SMOQ99835 787 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 ELOVL4Q9GZR5 314 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 KCTD10Q9H3F6 313 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 KRT82Q9NSB4 513 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 FAM49BQ9NUQ9 324 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 EXOC1Q9NV70 894 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 DMAC2Q9NW81 257 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 OSER1Q9NX31 292 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 GMIPQ9P107 970 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 EBF1Q9UH73 591 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 CFAP45Q9UL16 551 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 ZDHHC9Q9Y397 364 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 MAP1BP46821 2468 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 UBE4BO95155 1302 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 TNRC6BQ9UPQ9 1833 aaKnown RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 DOCK9Q9BZ29 2069 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 CACNA1EQ15878 2313 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 CABIN1Q9Y6J0 2220 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 BCLAF3A2AJT9 711 aaKnown RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 TBC1D3BA6NDS4 549 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 SLC9A3R1O14745 358 aaPredicted RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 ADAM23O75077 832 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 RHOBTB1O94844 696 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 RTN3O95197 1032 aaPredicted RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 KIF20AO95235 890 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 KAT7O95251 611 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 BPNT1O95861 308 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 HLA-DRAP01903 254 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 NR3C1P04150 777 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 RPN1P04843 607 aaKnown RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 APODP05090 189 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 TRIM49P0CI25 452 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 TRIM49CP0CI26 452 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 ADH5P11766 374 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 ATF4P18848 351 aaPredicted RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 CMA1P23946 247 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 KIR2DL1P43626 348 aaPredicted RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 ASPAP45381 313 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 PPP3CCP48454 512 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 GCLMP48507 274 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 PDE6CP51160 858 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 VAMP7P51809 220 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 NDUFA8P51970 172 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 RAC1P63000 192 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 MRPS21P82921 87 aaKnown RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 PPP3CAQ08209 521 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 INPP5AQ14642 412 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 SGSM1Q2NKQ1 1148 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 USP39Q53GS9 565 aaKnown RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 RNF43Q68DV7 783 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 SHISA2Q6UWI4 295 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 GK5Q6ZS86 529 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 TPGS1Q6ZTW0 290 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 ACAD11Q709F0 780 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 ARMCX6Q7L4S7 300 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 GPRIN1Q7Z2K8 1008 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 MIB1Q86YT6 1006 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 TMEFF1Q8IYR6 380 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 CRYBG2Q8N1P7 616 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 AGGF1Q8N302 714 aaeCLIP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 IL17RCQ8NAC3 791 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 SLC2A14Q8TDB8 520 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 TAS1R2Q8TE23 839 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 HMGB4Q8WW32 186 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 GATAD2BQ8WXI9 593 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 PIGKQ92643 395 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 EXOC4Q96A65 974 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 CYFIP2Q96F07 1278 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 SMARCD1Q96GM5 515 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 TNIP3Q96KP6 325 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 TWNKQ96RR1 684 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 ACOX2Q99424 681 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 LSM14BQ9BX40 385 aaKnown RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 NT5C1AQ9BXI3 368 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 NACA2Q9H009 215 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 MAGEF1Q9HAY2 307 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 APOBEC3GQ9HC16 384 aaKnown RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 FSCN3Q9NQT6 498 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 ARHGEF4Q9NR80 690 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 SPHK2Q9NRA0 654 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 TMEM74BQ9NUR3 256 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 PLK2Q9NYY3 685 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms