RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 ZNF844Q08AG5 666 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 NME3Q13232 169 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 BTG3Q14201 252 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 KCNJ11Q14654 390 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 KLHL38Q2WGJ6 581 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 CCDC38Q502W7 563 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 AFMIDQ63HM1 303 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 ELMSAN1Q6PJG2 1045 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 ZNF783Q6ZMS7 281 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 CCDC149Q6ZUS6 474 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 HFE2Q6ZVN8 426 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 SCN4BQ8IWT1 228 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 UMODL1-AS1Q8N2C9 162 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 LEMD2Q8NC56 503 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 HASPINQ8TF76 798 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 HERVK_113Q902F9 699 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 CPT1BQ92523 772 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 CENPTQ96BT3 561 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 VWCEQ96DN2 955 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 TRIM31Q9BZY9 425 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 TKTL2Q9H0I9 626 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 MRPL17Q9NRX2 175 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 DNMT3LQ9UJW3 386 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 ZNF510Q9Y2H8 683 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 CHD5Q8TDI0 1954 aa7.05□□□□□ -1.28
ECHDC1-210ENST00000454859 MAGEB16A2A368 324 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 DRGXA6NNA5 263 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 KCNN4O15554 427 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 SUN1O94901 812 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 RB1P06400 928 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 GOT1P17174 413 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 ERCC2P18074 760 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 IGFBP6P24592 240 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 ETFBP38117 255 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 ALDH1A3P47895 512 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 TBX4P57082 545 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 DYNLT1P63172 113 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 IFI35P80217 286 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 FPGSQ05932 587 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 MMRN1Q13201 1228 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 TRADDQ15628 312 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 CA9Q16790 459 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 TCTN1Q2MV58 587 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 RTP2Q5QGT7 225 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 CEP85LQ5SZL2 805 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 ARHGEF18Q6ZSZ5 1173 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 DEFB128Q7Z7B8 93 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 LINC00523Q86TU6 105 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 CEP57Q86XR8 500 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 GSPT2Q8IYD1 628 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 RIN2Q8WYP3 895 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 RNF34Q969K3 372 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 TLCD1Q96CP7 247 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 TMEM209Q96SK2 561 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 CDC42EP4Q9H3Q1 356 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 SSU72Q9NP77 194 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 CACNG4Q9UBN1 327 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 PLXNA4Q9HCM2 1894 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 A0A1W2PQH9 124 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 TRIM43BA6NCK2 446 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 RASGRF2O14827 1237 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 CACNG3O60359 315 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 LILRB3O75022 631 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 GJB5O95377 273 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 IFNB1P01574 187 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 CTSAP10619 480 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 TFE3P19532 575 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 CES1P23141 567 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 DDX6P26196 483 aaKnown RBP eCLIP7.04□□□□□ -1.282e-7■■■□□ 18.3
ECHDC1-210ENST00000454859 STX2P32856 288 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 ATP5C1P36542 298 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 MAGEA3P43357 314 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 EPHB3P54753 998 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 OXCT1P55809 520 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 PRPSAP1Q14558 356 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 PARP15Q460N3 678 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 FIBCD1Q8N539 461 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 RTL3Q8N8U3 475 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 FAM71DQ8N9W8 422 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 TRIM43Q96BQ3 446 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 ZNF599Q96NL3 588 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 YME1L1Q96TA2 773 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 ADAM33Q9BZ11 813 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 EPB41L4BQ9H329 900 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 ETNK2Q9NVF9 386 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 TMEM248Q9NWD8 314 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 TRPM5Q9NZQ8 1165 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 HEY1Q9Y5J3 304 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 CDY1Q9Y6F8 540 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 ANAPC1Q9H1A4 1944 aa7.04□□□□□ -1.28
ECHDC1-210ENST00000454859 H3BQF6 201 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 SHOX2O60902 331 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 PAGE1O75459 146 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 SRGAP2BP0DMP2 458 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 AMPD1P23109 780 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 CNTFP26441 200 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 HOXA9P31269 272 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 ELF1P32519 619 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 GARSP41250 739 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms