RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 LILRA4P59901 499 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 ZNF33AQ06730 810 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 SOX4Q06945 474 aaPredicted RBP12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 TAF11Q15544 211 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 DNAL1Q4LDG9 190 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 RAB41Q5JT25 222 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 TEDDM1Q5T9Z0 273 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 GRTP1Q5TC63 336 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 MROH9Q5TGP6 573 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 DSTYKQ6XUX3 929 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 DPP9Q86TI2 863 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 APLFQ8IW19 511 aaPredicted RBP12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 PYROXD2Q8N2H3 581 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 ATP2A3Q93084 1043 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 PRR11Q96HE9 360 aaPredicted RBP12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 CPNE1Q99829 537 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 MECRQ9BV79 373 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 XPNPEP3Q9NQH7 507 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 DNAJC28Q9NX36 388 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 STX18Q9P2W9 335 aaKnown RBP12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 Q9Y3F1 56 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 HES2Q9Y543 173 aa12.87□□□□□ -0.35
ECHDC1-209ENST00000454591 HCRTO43612 131 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 MAP3K6O95382 1288 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 PROCP04070 461 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 PRKCGP05129 697 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 RPSAP08865 295 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 PDGFRBP09619 1106 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 PTPN1P18031 435 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 DNAJB1P25685 340 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 ADRA1BP35368 520 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 GP5P40197 560 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 VHLP40337 213 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 GARSP41250 739 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 PTDSS1P48651 473 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 HARS2P49590 506 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 PPIDQ08752 370 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 ADIGQ0VDE8 80 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 TUBB3Q13509 450 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 PDE1CQ14123 709 aaPredicted RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 MFSD10Q14728 455 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 FASTKD1Q53R41 847 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 GLRA4Q5JXX5 417 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 RABGAP1LQ5R372 815 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 KCTD11Q693B1 232 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 RFWD3Q6PCD5 774 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 CLEC20AQ6ZU45 233 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 RFX8Q6ZV50 586 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 NET1Q7Z628 596 aaPredicted RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 TTC7BQ86TV6 843 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 TMEM135Q86UB9 458 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 FAM131BQ86XD5 332 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 TREML1Q86YW5 311 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 ARID3BQ8IVW6 561 aaPredicted RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 WDR75Q8IWA0 830 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 ZNF567Q8N184 647 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 TMEM86AQ8N2M4 240 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 PDCD7Q8N8D1 485 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 SMG8Q8ND04 991 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 TTC8Q8TAM2 541 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 PIWIL2Q8TC59 973 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 MCUR1Q96AQ8 359 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 PPP1R10Q96QC0 940 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 VAT1Q99536 393 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 LGMNQ99538 433 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 MAGEB5Q9BZ81 275 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 SLC13A1Q9BZW2 595 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 FAM49AQ9H0Q0 323 aaPredicted RBP12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 PRDM12Q9H4Q4 367 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 CASS4Q9NQ75 786 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 ZNF212Q9UDV6 495 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 MFHAS1Q9Y4C4 1052 aa12.86□□□□□ -0.35
ECHDC1-209ENST00000454591 AP3B1O00203 1094 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 CYB561D2O14569 222 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 ENTPD5O75356 428 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 TM7SF2O76062 418 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 PSMG1O95456 288 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 AP2A1O95782 977 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 POLBP06746 335 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 ITGA2BP08514 1039 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 MGAT1P26572 445 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 PSMB4P28070 264 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 PSEN2P49810 448 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 CSRP3P50461 194 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 CSE1LP55060 971 aaKnown RBP12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 FKBP1BP68106 108 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 PCLAFQ15004 111 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 TSNAXIP1Q2TAA8 658 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 TRMT5Q32P41 509 aaKnown RBP12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 CCDC153Q494R4 210 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 KHDC1Q4VXA5 237 aaKnown RBP12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 ACSBG2Q5FVE4 666 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 ZNF618Q5T7W0 954 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 ARMC3Q5W041 872 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 ALYREFQ86V81 257 aaKnown RBP12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 LCA5Q86VQ0 697 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 NPLOC4Q8TAT6 608 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 BRI3BPQ8WY22 251 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms