RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ITGAVP06756 1048 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 HMGA1P17096 107 aaKnown RBP5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 DDX6P26196 483 aaKnown RBP eCLIP5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 CDC25CP30307 473 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 NMT1P30419 496 aaKnown RBP5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 NTSR1P30989 418 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 GRIK1P39086 918 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 TPMTP51580 245 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 PTENP60484 403 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 HAND2P61296 217 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 BFSP1Q12934 665 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 BNIP3Q12983 259 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 DDX10Q13206 875 aaKnown RBP5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 GPR17Q13304 367 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 SFRP5Q5T4F7 317 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 RHBDF2Q6PJF5 856 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 FAM214BQ7L5A3 538 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 HEATR4Q86WZ0 1026 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 CDR2LQ86X02 465 aaPredicted RBP5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 ZDHHC13Q8IUH4 622 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 SIRT2Q8IXJ6 389 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 HACE1Q8IYU2 909 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 ATAD1Q8NBU5 361 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 DNAJB8Q8NHS0 232 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 PDCD6IPQ8WUM4 868 aaKnown RBP5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 RNF141Q8WVD5 230 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 UBXN4Q92575 508 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 ATXN7L3BQ96GX2 97 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 CYP2S1Q96SQ9 504 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 ASPNQ9BXN1 380 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 PCED1AQ9H1Q7 454 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 ZFP64Q9NPA5 681 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 TBC1D22BQ9NU19 505 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 TPX2Q9ULW0 747 aaKnown RBP5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 ZNF638Q14966 1978 aaKnown RBP5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 ABCA4P78363 2273 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 MYMKA6NI61 221 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 TRIM38O00635 465 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 TBX3O15119 743 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 VILLO15195 856 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 B4GALT5O43286 388 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 MARCH6O60337 910 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 CLEC3AO75596 197 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 TNFSF15O95150 251 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 NPTXRO95502 500 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 NADKO95544 446 aaPredicted RBP5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 WNT1P04628 370 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 APODP05090 189 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 CYP17A1P05093 508 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 CT47B1P0C2W7 299 aaPredicted RBP5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 OR4Q2P0C623 313 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 THEGLP0DJG4 465 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 ATF6P18850 670 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 SLC6A4P31645 630 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 WASP42768 502 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 RXRGP48443 463 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 IFNAR2P48551 515 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 NT5C2P49902 561 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 MBTD1Q05BQ5 628 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 KLRB1Q12918 225 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 MTERF2Q49AM1 385 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 C3orf38Q5JPI3 329 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 SLC27A1Q6PCB7 646 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 ANO5Q75V66 913 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 ZNF765Q7L2R6 523 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 CDH24Q86UP0 819 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 IQCA1Q86XH1 822 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 NSUN7Q8NE18 718 aaKnown RBP5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 PIWIL2Q8TC59 973 aaKnown RBP5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 GRAMD1AQ96CP6 724 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 ERLEC1Q96DZ1 483 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 PGLYRP2Q96PD5 576 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 DPH2Q9BQC3 489 aaPredicted RBP5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 KRTAP17-1Q9BYP8 105 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 MKRN2Q9H000 416 aaKnown RBP5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 GOLGA2P5Q9HBQ8 144 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 ARHGEF4Q9NR80 690 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 HSFX1Q9UBD0 423 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 PCDHGA7Q9Y5G6 932 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 ENTPD2Q9Y5L3 495 aa5.67□□□□□ -1.5
SBDSP1-204ENST00000453858 ANK3Q12955 4377 aaKnown RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 A0A1W2PQH9 124 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 PRR19A6NJB7 356 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 TMEM200CA6NKL6 621 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 BTBD18B2RXH4 712 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 C10orf142B7Z368 130 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 CYP26A1O43174 497 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 SIGLEC6O43699 453 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 RAB11FIP3O75154 756 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 LEFTY1O75610 366 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 UBOX5O94941 541 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 SIX3O95343 332 aaPredicted RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 LARGE1O95461 756 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 NFATC1O95644 943 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 ITGA2BP08514 1039 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 CD99P14209 185 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 FOSL1P15407 271 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 EPHA8P29322 1005 aaPredicted RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 OXTRP30559 389 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms