RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 PREBQ9HCU5 417 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 ALG13Q9NP73 1137 aaKnown RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 ARHGEF3Q9NR81 526 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 DUSP22Q9NRW4 184 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 BLOC1S4Q9NUP1 217 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 SYBUQ9NX95 663 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 CWC25Q9NXE8 425 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 GAR1Q9NY12 217 aaKnown RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 DLL3Q9NYJ7 618 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 SEMA5BQ9P283 1151 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 MGAT4CQ9UBM8 478 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 TESQ9UGI8 421 aaKnown RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 AMFRQ9UKV5 643 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 TRPC5Q9UL62 973 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBX20Q9UMR3 447 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 RCE1Q9Y256 329 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 PCDHA10Q9Y5I2 948 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 DISP3Q9P2K9 1392 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 AP4M1O00189 453 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 SUV39H1O43463 412 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 PLOD3O60568 738 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 CHRM2P08172 466 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 CSF1P09603 554 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 TMIGD3P0DMS9 266 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 MYCLP12524 364 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 ZNF37AP17032 561 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 DUSP1P28562 367 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 IGHMBP2P38935 993 aaKnown RBP4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 PDE1AP54750 535 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 GPC5P78333 572 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 PSG6Q00889 435 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 TUBA3CQ13748 450 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 CBFBQ13951 182 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D25Q3MII6 688 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 CCDC92Q53HC0 331 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 PLAC9Q5JTB6 97 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 MIIPQ5JXC2 388 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 LY6G5CQ5SRR4 150 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 FNDC7Q5VTL7 733 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 NAA35Q5VZE5 725 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 ANKRD40Q6AI12 368 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 DENND1BQ6P3S1 775 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 ANKRD16Q6P6B7 361 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 TUBA3EQ6PEY2 450 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 DSTYKQ6XUX3 929 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 Q6ZNX1 250 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 P3H2Q8IVL5 708 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 LINC01465Q8N7H1 131 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 FAM71DQ8N9W8 422 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 PROKR1Q8TCW9 393 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 LINC00476Q8WZB0 136 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 EDC3Q96F86 508 aaKnown RBP4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 KAZALD1Q96I82 304 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 COQ10AQ96MF6 247 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 SNX18Q96RF0 628 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 HERC2P3Q9BVR0 1158 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 CINPQ9BW66 212 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 FSD1LQ9BXM9 530 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 PAIP1Q9H074 479 aaKnown RBP4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 PRDM13Q9H4Q3 707 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 SH3GLB2Q9NR46 395 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 SNX15Q9NRS6 342 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 SMC4Q9NTJ3 1288 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 NKIRAS2Q9NYR9 191 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 ACAD8Q9UKU7 415 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 RAB21Q9UL25 225 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 SLC12A4Q9UP95 1085 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 GAPVD1Q14C86 1478 aa4.18□□□□□ -1.74
HMGB1P15-201ENST00000453854 COL4A3Q01955 1670 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 AGAP5A6NIR3 686 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 KLK10O43240 276 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 URI1O94763 535 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 TMEM63AO94886 807 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBX18O95935 607 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 HNRNPA1P09651 372 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 NR2F6P10588 404 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 ACP5P13686 325 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 PSMC2P35998 433 aaKnown RBP4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 PNPLA4P41247 253 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 RAD52P43351 418 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 RCAN1P53805 252 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 TXNL4AP83876 142 aaKnown RBP4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 TAP1Q03518 808 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 CCDC15Q0P6D6 951 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 LMAN2Q12907 356 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 KAZNQ674X7 775 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 DENND2CQ68D51 928 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 IGFL4Q6B9Z1 124 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 ACAD10Q6JQN1 1059 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 KCNV1Q6PIU1 500 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 FASTKD5Q7L8L6 764 aaKnown RBP4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 GALNT4Q8N4A0 578 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 TCP11L2Q8N4U5 519 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 C12orf76Q8N812 135 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 LINS1Q8NG48 757 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 TFAP2BQ92481 460 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 RSRC1Q96IZ7 334 aaKnown RBP4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 C7orf26Q96N11 449 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 PPP1R10Q96QC0 940 aaKnown RBP4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 TREX2Q9BQ50 279 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms