RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SIGLEC14Q08ET2 396 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 CBLBQ13191 982 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 RUNX3Q13761 415 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 TCEAL1Q15170 157 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 EML3Q32P44 896 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 ARL13BQ3SXY8 428 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 ADGRF1Q5T601 910 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 BNIPLQ7Z465 357 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 RALGPS2Q86X27 583 aaPredicted RBP9.04□□□□□ -0.96
COL28A1-205ENST00000453441 CCDC26Q8TAB7 109 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 RXFP2Q8WXD0 754 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 CENPIQ92674 756 aaPredicted RBP9.04□□□□□ -0.96
COL28A1-205ENST00000453441 EDAQ92838 391 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 RNF34Q969K3 372 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 FCRL2Q96LA5 508 aaPredicted RBP9.04□□□□□ -0.96
COL28A1-205ENST00000453441 NECAB3Q96P71 396 aaPredicted RBP9.04□□□□□ -0.96
COL28A1-205ENST00000453441 LRRC3BQ96PB8 259 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 MCEEQ96PE7 176 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 NELL2Q99435 816 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 RPP25Q9BUL9 199 aaKnown RBP9.04□□□□□ -0.96
COL28A1-205ENST00000453441 CD320Q9NPF0 282 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 MUTYHQ9UIF7 546 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 FBXL21Q9UKT6 434 aa9.04□□□□□ -0.96
COL28A1-205ENST00000453441 MRPS17Q9Y2R5 130 aaKnown RBP9.04□□□□□ -0.96
COL28A1-205ENST00000453441 EPN1Q9Y6I3 576 aaPredicted RBP9.04□□□□□ -0.96
COL28A1-205ENST00000453441 TMEM191CA6NGB0 347 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 KCNU1A8MYU2 1149 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 PI4K2BG5E9Z4 385 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 ARHGAP6O43182 974 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 HOXC11O43248 304 aaPredicted RBP9.03□□□□□ -0.96
COL28A1-205ENST00000453441 MSI1O43347 362 aaKnown RBP9.03□□□□□ -0.96
COL28A1-205ENST00000453441 ACSL4O60488 711 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 GREM1O60565 184 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 RNF8O76064 485 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 NDUFA10O95299 355 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 HMBSP08397 361 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 ZXDBP98169 803 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 NME3Q13232 169 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 PIGHQ14442 188 aaPredicted RBP9.03□□□□□ -0.96
COL28A1-205ENST00000453441 E2F5Q15329 346 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 MLF2Q15773 248 aaPredicted RBP9.03□□□□□ -0.96
COL28A1-205ENST00000453441 CCDC14Q49A88 953 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 MPPE1Q53F39 396 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 C2CD6Q53TS8 623 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 MPP7Q5T2T1 576 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 C6orf118Q5T5N4 469 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 TTC39BQ5VTQ0 682 aaPredicted RBP9.03□□□□□ -0.96
COL28A1-205ENST00000453441 PSTKQ8IV42 348 aaKnown RBP9.03□□□□□ -0.96
COL28A1-205ENST00000453441 DENND1CQ8IV53 801 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 BBS7Q8IWZ6 715 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 ADGRG2Q8IZP9 1017 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 JOSD2Q8TAC2 188 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 RFFLQ8WZ73 363 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 NTAN1Q96AB6 310 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 C1orf74Q96LT6 269 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 CFAP57Q96MR6 1250 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 XPO6Q96QU8 1125 aaKnown RBP9.03□□□□□ -0.96
COL28A1-205ENST00000453441 TBCBQ99426 244 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 THAP2Q9H0W7 228 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 RETREG1Q9H6L5 497 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 WDCPQ9H6R7 721 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 ECT2Q9H8V3 914 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 ARHGEF3Q9NR81 526 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 SPHK2Q9NRA0 654 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 TMPRSS4Q9NRS4 437 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 ARHGEF38Q9NXL2 777 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 IP6K2Q9UHH9 426 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 AGO1Q9UL18 857 aaKnown RBP9.03□□□□□ -0.96
COL28A1-205ENST00000453441 WNT6Q9Y6F9 365 aa9.03□□□□□ -0.96
COL28A1-205ENST00000453441 COL4A2P08572 1712 aa9.02□□□□□ -0.96
COL28A1-205ENST00000453441 TICRRQ7Z2Z1 1910 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 A0A0A6YYK5 440 aaPredicted RBP9.02□□□□□ -0.97
COL28A1-205ENST00000453441 MYO1FO00160 1098 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 NARSO43776 548 aaKnown RBP9.02□□□□□ -0.97
COL28A1-205ENST00000453441 LILRA1O75019 489 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 MTA2O94776 668 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 KLKB1P03952 638 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 CYP17A1P05093 508 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 ADH5P11766 374 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 PSMA2P25787 234 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 HTR7P34969 479 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 PCK1P35558 622 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 ARHGAP25P42331 645 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 ABL2P42684 1182 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 MAGEA1P43355 309 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 MAGEA9P43362 315 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 ZNF135P52742 658 aaPredicted RBP9.02□□□□□ -0.97
COL28A1-205ENST00000453441 HADHBP55084 474 aaKnown RBP9.02□□□□□ -0.97
COL28A1-205ENST00000453441 STARD6P59095 220 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 RPL7AP62424 266 aaKnown RBP9.02□□□□□ -0.97
COL28A1-205ENST00000453441 SCAPQ12770 1279 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 DHCR24Q15392 516 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 SLC44A4Q53GD3 710 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 ZC3H12AQ5D1E8 599 aaKnown RBP9.02□□□□□ -0.97
COL28A1-205ENST00000453441 RABGAP1LQ5R372 815 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 OTUD1Q5VV17 481 aaPredicted RBP9.02□□□□□ -0.97
COL28A1-205ENST00000453441 CCDC117Q8IWD4 279 aaPredicted RBP9.02□□□□□ -0.97
COL28A1-205ENST00000453441 EMC1Q8N766 993 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 NIPA2Q8N8Q9 360 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 HJURPQ8NCD3 748 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms