RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 PDGFDQ9GZP0 370 aaPredicted RBP7.93□□□□□ -1.14
RIF1-206ENST00000453091 ZFYVE28Q9HCC9 887 aa7.93□□□□□ -1.14
RIF1-206ENST00000453091 ZC4H2Q9NQZ6 224 aa7.93□□□□□ -1.14
RIF1-206ENST00000453091 ABCA9Q8IUA7 1624 aa7.93□□□□□ -1.14
RIF1-206ENST00000453091 CD48P09326 243 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 C1QBPQ07021 282 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 PDK2Q15119 407 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 LDLRAP1Q5SW96 308 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 SPATA20Q8TB22 786 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 LENG1Q96BZ8 264 aaPredicted RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 DCUN1D1Q96GG9 259 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 TRAPPC9Q96Q05 1148 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 PARK7Q99497 189 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 LGMNQ99538 433 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 CINPQ9BW66 212 aaPredicted RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 C6orf62Q9GZU0 229 aaPredicted RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 SYNDIG1Q9H7V2 258 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 A1CFQ9NQ94 594 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 USE1Q9NZ43 259 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 TRIM13O60858 407 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 HNRNPLP14866 589 aaKnown RBP eCLIP7.92□□□□□ -1.141e-8■■■■□ 26.6
RIF1-206ENST00000453091 PGAM1P18669 254 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 GALK1P51570 392 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 AGAP9Q5VTM2 703 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 RRM2BQ7LG56 351 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 MILR1Q7Z6M3 343 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 HPS6Q86YV9 775 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 MAP4K3Q8IVH8 894 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 TRPM4Q8TD43 1214 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 NPAS2Q99743 824 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 ZNF212Q9UDV6 495 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 RBMX2Q9Y388 322 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 STARD13Q9Y3M8 1113 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 GRIN2DO15399 1336 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 IQGAP1P46940 1657 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 STX7O15400 261 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 PEX11AO75192 247 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 PCNAP12004 261 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 NR4A1P22736 598 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 EPHX2P34913 555 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 RALGDSQ12967 914 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 MRPL28Q13084 256 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 PTPN20Q4JDL3 420 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 STK32CQ86UX6 486 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 LPIN3Q9BQK8 851 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 TRMT6Q9UJA5 497 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 FMO4P31512 558 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 PLEKHH3Q7Z736 793 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 ELMOD1Q8N336 334 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 DDI1Q8WTU0 396 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 GFM2Q969S9 779 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 KATNAL1Q9BW62 490 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 CATSPERBQ9H7T0 1116 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 WDR41Q9HAD4 459 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 THAP1Q9NVV9 213 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 RBM22Q9NW64 420 aaKnown RBP eCLIP7.92□□□□□ -1.141e-7■■■■■ 41.1
RIF1-206ENST00000453091 SLC17A6Q9P2U8 582 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 CRLS1Q9UJA2 301 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 RIPK3Q9Y572 518 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 BCL9O00512 1426 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 ZNF536O15090 1300 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 ADGRB2O60241 1585 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 EDF1O60869 148 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 CLASP2O75122 1294 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 ACADSBP45954 432 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 SERPINB10P48595 397 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 SLC16A1P53985 500 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 YTHDF3Q7Z739 585 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 RDM1Q8NG50 284 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 RIC8BQ9NVN3 520 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 DDX43Q9NXZ2 648 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 UBQLN1Q9UMX0 589 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 ZMYM2Q9UBW7 1377 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 PIRTP0C851 137 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 MMP13P45452 471 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 GK5Q6ZS86 529 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 KATNAL2Q8IYT4 538 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 B3GALNT2Q8NCR0 500 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 GMCL1Q96IK5 515 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 YIPF2Q9BWQ6 316 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 LRMDAQ9H2I8 198 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 ALG9Q9H6U8 611 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 AGLP35573 1532 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 EPB42P16452 691 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 FOLH1Q04609 750 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 CHRNB3Q05901 458 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 MAGEE2Q8TD90 523 aaPredicted RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 LZICQ8WZA0 190 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 SNRNP25Q9BV90 132 aaKnown RBP7.92□□□□□ -1.14
RIF1-206ENST00000453091 SLC4A5Q9BY07 1137 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 NMUR2Q9GZQ4 415 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 PCYOX1Q9UHG3 505 aa7.92□□□□□ -1.14
RIF1-206ENST00000453091 SLC12A8A0AV02 714 aa7.91□□□□□ -1.14
RIF1-206ENST00000453091 SLC26A4O43511 780 aa7.91□□□□□ -1.14
RIF1-206ENST00000453091 CCR1P32246 355 aa7.91□□□□□ -1.14
RIF1-206ENST00000453091 GP5P40197 560 aa7.91□□□□□ -1.14
RIF1-206ENST00000453091 CHN2P52757 468 aa7.91□□□□□ -1.14
RIF1-206ENST00000453091 RAD51Q06609 339 aa7.91□□□□□ -1.14
RIF1-206ENST00000453091 CDC16Q13042 620 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms