RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 YPEL5P62699 121 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 JAG1P78504 1218 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 EXOSC9Q06265 439 aaKnown RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 RUNX1T1Q06455 604 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 NSUN2Q08J23 767 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 PTP4A2Q12974 167 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 CTBP1Q13363 440 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 PDCLQ13371 301 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 IRF3Q14653 427 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 TRADDQ15628 312 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 XKR9Q5GH70 373 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 HABP4Q5JVS0 413 aaKnown RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 DNTTIP2Q5QJE6 756 aaKnown RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 TTC22Q5TAA0 569 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 TPGS2Q68CL5 300 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 OTUD7BQ6GQQ9 843 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC25A24Q6NUK1 477 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 RINT1Q6NUQ1 792 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 GALNT18Q6P9A2 607 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 UNQ6494/PRO21346Q6UXR6 183 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 CYP2R1Q6VVX0 501 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 PPP1R21Q6ZMI0 780 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 LINC00696Q6ZRV3 163 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 KIAA0408Q6ZU52 694 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 MARK2Q7KZI7 788 aaKnown RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 CACNA2D4Q7Z3S7 1137 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 ZNF605Q86T29 641 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 SPATA2LQ8IUW3 424 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 CCDC28AQ8IWP9 274 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 RHOT2Q8IXI1 618 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM217AQ8IXS0 508 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 ANKRD44Q8N8A2 993 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 DCBLD1Q8N8Z6 715 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 MRPL43Q8N983 215 aaKnown RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 ANKRD53Q8N9V6 530 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 HIPK4Q8NE63 616 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 NEK11Q8NG66 645 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 PSMA8Q8TAA3 256 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 PIP4K2CQ8TBX8 421 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 POMGNT1Q8WZA1 660 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 TNPO1Q92973 898 aaKnown RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 MRGPRX4Q96LA9 322 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 CEP295NLQ96MC4 621 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 TCEANC2Q96MN5 208 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 PTCHD1Q96NR3 888 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 RUFY1Q96T51 708 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 AGAP2Q99490 1192 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 NAA11Q9BSU3 229 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 NACAP1Q9BZK3 213 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM129AQ9BZQ8 928 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 NYXQ9GZU5 481 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 STMN4Q9H169 189 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 VPS16Q9H269 839 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 MRPL46Q9H2W6 279 aaKnown RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 ST6GALNAC4Q9H4F1 302 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 SH2D4AQ9H788 454 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 MANSC1Q9H8J5 431 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 RXFP1Q9HBX9 757 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 CRLF2Q9HC73 371 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 USP40Q9NVE5 1235 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 ATAD3AQ9NVI7 634 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 RIC8BQ9NVN3 520 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 ZDHHC7Q9NXF8 308 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 MTUS1Q9ULD2 1270 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 CA14Q9ULX7 337 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 PPIEQ9UNP9 301 aaKnown RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 TBC1D30Q9Y2I9 924 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 PCDHA5Q9Y5H7 936 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 TTC21BQ7Z4L5 1316 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 KDM3AQ9Y4C1 1321 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 DBX1A6NMT0 343 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 TMEM233B4DJY2 109 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 CTDSP2O14595 271 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 FGF10O15520 208 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 KCNQ3O43525 872 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 TLR2O60603 784 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 ABHD16AO95870 558 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 ABCB1P08183 1280 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 TPM1P09493 284 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 CKBP12277 381 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 KRT5P13647 590 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 PNLIPP16233 465 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 PFKLP17858 780 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 GNAT2P19087 354 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 HOXC8P31273 242 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 GJA4P35212 333 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 ADRA1BP35368 520 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 BMPR1AP36894 532 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 CASP3P42574 277 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 MAGEA4P43358 317 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 RAP1GAPP47736 663 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 CASP9P55211 416 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 CDH8P55286 799 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 TGFB2P61812 414 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 TEFQ10587 303 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 TARDBPQ13148 414 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 AIMP2Q13155 320 aaKnown RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 CAPSQ13938 189 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 HABP2Q14520 560 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 SSPNQ14714 243 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms