RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 ARID5AQ03989 594 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 TRIP4Q15650 581 aaPredicted RBP10.59□□□□□ -0.71
LINC01004-202ENST00000450686 NFIL3Q16649 462 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 PTPRNQ16849 979 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 COL28A1Q2UY09 1125 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 BSPRYQ5W0U4 402 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 ARHGAP17Q68EM7 881 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 CCNI2Q6ZMN8 369 aaPredicted RBP10.59□□□□□ -0.71
LINC01004-202ENST00000450686 MMS22LQ6ZRQ5 1243 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 ADIPOR2Q86V24 386 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 FAM217AQ8IXS0 508 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 CPXM2Q8N436 756 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 ZNF276Q8N554 614 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 ANKRD52Q8NB46 1076 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 OR2T3Q8NH03 318 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 HNRNPLLQ8WVV9 542 aaKnown RBP10.59□□□□□ -0.71
LINC01004-202ENST00000450686 TFAP2BQ92481 460 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 KAT5Q92993 513 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 PLD4Q96BZ4 506 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 ZSWIM1Q9BR11 485 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 LRRC4Q9HBW1 653 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 PRSS16Q9NQE7 514 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 SERGEFQ9UGK8 458 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 GGA2Q9UJY4 613 aa10.59□□□□□ -0.71
LINC01004-202ENST00000450686 KALRNO60229 2985 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 SETXQ7Z333 2677 aaKnown RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 DOCK9Q9BZ29 2069 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 FAM237AA0A1B0GTK4 181 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 FAM221BA6H8Z2 402 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 FAM47DPA6NHR8 397 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 CBX4O00257 560 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 XPO1O14980 1071 aaKnown RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 TBL1XO60907 577 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 IGLV3-19P01714 112 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 EPB41P11171 864 aaKnown RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 RPL13P26373 211 aaKnown RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 PRCPP42785 496 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 CTSOP43234 321 aaPredicted RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 KRT85P78386 507 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 SLC14A1Q13336 389 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 CAMK2GQ13555 558 aaPredicted RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 CUL2Q13617 745 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 MPPE1Q53F39 396 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 MBLAC2Q68D91 279 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 ATL3Q6DD88 541 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 PM20D1Q6GTS8 502 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 ISM2Q6H9L7 571 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 NADSYN1Q6IA69 706 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 THSD4Q6ZMP0 1018 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 METTL3Q86U44 580 aaKnown RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 ARHGAP18Q8N392 663 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 ANKK1Q8NFD2 765 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 CADM4Q8NFZ8 388 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 BAHD1Q8TBE0 780 aaPredicted RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 ADAM32Q8TC27 787 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 RHBDD1Q8TEB9 315 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 RNF139Q8WU17 664 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 CCDC47Q96A33 483 aaKnown RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 BIRC7Q96CA5 298 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 PRICKLE1Q96MT3 831 aaPredicted RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 IPO9Q96P70 1041 aaKnown RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 CDK5RAP1Q96SZ6 601 aaKnown RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 NUP58Q9BVL2 599 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 TMEM245Q9H330 911 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 TM9SF3Q9HD45 589 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 USP25Q9UHP3 1055 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.58□□□□□ -0.72
LINC01004-202ENST00000450686 GPSM3Q9Y4H4 160 aa10.58□□□□□ -0.72
LINC01004-202ENST00000450686 H0Y8X5 98 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 RNF225M0QZC1 329 aaPredicted RBP10.57□□□□□ -0.72
LINC01004-202ENST00000450686 O00370 1275 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 WNT9AO14904 365 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 ZNF202O95125 648 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 SEMA4FO95754 770 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 CER1O95813 267 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 MYL1P05976 194 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 PABPC1P11940 636 aaKnown RBP10.57□□□□□ -0.72
LINC01004-202ENST00000450686 BRD2P25440 801 aaKnown RBP10.57□□□□□ -0.72
LINC01004-202ENST00000450686 OXTRP30559 389 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 GTF2H1P32780 548 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 RDXP35241 583 aaKnown RBP10.57□□□□□ -0.72
LINC01004-202ENST00000450686 HARS2P49590 506 aaKnown RBP10.57□□□□□ -0.72
LINC01004-202ENST00000450686 BCAT1P54687 386 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 DAOAP59103 153 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 BST2Q10589 180 aaKnown RBP10.57□□□□□ -0.72
LINC01004-202ENST00000450686 EIF4HQ15056 248 aaKnown RBP10.57□□□□□ -0.72
LINC01004-202ENST00000450686 SGO2Q562F6 1265 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 FAM133BQ5BKY9 247 aaKnown RBP10.57□□□□□ -0.72
LINC01004-202ENST00000450686 ANKRD40Q6AI12 368 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 PMF1Q6P1K2 205 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 DHX40Q8IX18 779 aaKnown RBP10.57□□□□□ -0.72
LINC01004-202ENST00000450686 SIX6OS1Q8N1H7 587 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 CFAP52Q8N1V2 620 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 UBR7Q8N806 425 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 TMA16Q96EY4 203 aaKnown RBP10.57□□□□□ -0.72
LINC01004-202ENST00000450686 SLC6A18Q96N87 628 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 ZDHHC5Q9C0B5 715 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 MIS12Q9H081 205 aa10.57□□□□□ -0.72
LINC01004-202ENST00000450686 CCDC86Q9H6F5 360 aaKnown RBP10.57□□□□□ -0.72
LINC01004-202ENST00000450686 XPO7Q9UIA9 1087 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms