RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 WDTC1Q8N5D0 677 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 ATP6V0D2Q8N8Y2 350 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 CEP76Q8TAP6 659 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 FOXJ1Q92949 421 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 RNF34Q969K3 372 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 HSPA12BQ96MM6 686 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 PRICKLE1Q96MT3 831 aaPredicted RBP15.84■□□□□ 0.13
CHD3-205ENST00000449744 CNTNAP3BQ96NU0 1288 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 CNTNAP3Q9BZ76 1288 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 MKRN2Q9H000 416 aaKnown RBP15.84■□□□□ 0.13
CHD3-205ENST00000449744 NUCKS1Q9H1E3 243 aaKnown RBP15.84■□□□□ 0.13
CHD3-205ENST00000449744 FAM204AQ9H8W3 233 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 CD93Q9NPY3 652 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 ITM2CQ9NQX7 267 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.84■□□□□ 0.13
CHD3-205ENST00000449744 ASNSD1Q9NWL6 643 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 PILRBQ9UKJ0 227 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 NFE2L3Q9Y4A8 694 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 CACNA1BQ00975 2339 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 SYNJ2BP-COX16A0A087WUM0 186 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 TM4SF5O14894 197 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 HSF2BPO75031 334 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 TPM2P07951 284 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 DLDP09622 509 aaKnown RBP15.83■□□□□ 0.12
CHD3-205ENST00000449744 PNMA6AP0CW24 399 aaPredicted RBP15.83■□□□□ 0.12
CHD3-205ENST00000449744 SLC2A3P11169 496 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 OXTRP30559 389 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 CLCN1P35523 988 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 ATXN3P54252 364 aaPredicted RBP15.83■□□□□ 0.12
CHD3-205ENST00000449744 RPS24P62847 133 aaKnown RBP15.83■□□□□ 0.12
CHD3-205ENST00000449744 KCNMA1Q12791 1236 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 DRAP1Q14919 205 aaPredicted RBP15.83■□□□□ 0.12
CHD3-205ENST00000449744 TAF5Q15542 800 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 SYCP2LQ5T4T6 812 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 RAP1GAP2Q684P5 730 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 SLC23A3Q6PIS1 610 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 C11orf57Q6ZUT1 292 aaPredicted RBP15.83■□□□□ 0.12
CHD3-205ENST00000449744 CACUL1Q86Y37 369 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 FAM71AQ8IYT1 594 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 LGI2Q8N0V4 545 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 CFAP52Q8N1V2 620 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 OR2T3Q8NH03 318 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 FIBINQ8TAL6 211 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 ENOX1Q8TC92 643 aaKnown RBP15.83■□□□□ 0.12
CHD3-205ENST00000449744 WFDC5Q8TCV5 224 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 BTN2A3PQ96KV6 586 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 LSM14BQ9BX40 385 aaKnown RBP15.83■□□□□ 0.12
CHD3-205ENST00000449744 TAB2Q9NYJ8 693 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 COX16Q9P0S2 106 aa15.83■□□□□ 0.12
CHD3-205ENST00000449744 USP36Q9P275 1121 aaKnown RBP15.83■□□□□ 0.12
CHD3-205ENST00000449744 F5H5T6 163 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 H0Y626 953 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 GRAP2O75791 330 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 MOCS3O95396 460 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 IGLV3-25P01717 112 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 ADRB1P08588 477 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 ENGP17813 658 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 ABCB4P21439 1286 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 TACR2P21452 398 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 TPMTP51580 245 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 COPAP53621 1224 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 ST8SIA6P61647 398 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 GFPT1Q06210 699 aaPredicted RBP15.82■□□□□ 0.12
CHD3-205ENST00000449744 UAP1L1Q3KQV9 507 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 WDR45BQ5MNZ6 344 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 KLHDC7AQ5VTJ3 777 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 PEAR1Q5VY43 1037 aaPredicted RBP15.82■□□□□ 0.12
CHD3-205ENST00000449744 SASS6Q6UVJ0 657 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 FAM183BPQ6ZVS7 135 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 SLC41A1Q8IVJ1 513 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 ZNF366Q8N895 744 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 TMEM35BQ8NCS4 154 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 TOE1Q96GM8 510 aaKnown RBP15.82■□□□□ 0.12
CHD3-205ENST00000449744 ZNF419Q96HQ0 510 aaPredicted RBP15.82■□□□□ 0.12
CHD3-205ENST00000449744 SLC2A13Q96QE2 648 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 TMEM245Q9H330 911 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 PLCB1Q9NQ66 1216 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 DDIT4Q9NX09 232 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 WSB2Q9NYS7 404 aaPredicted RBP15.82■□□□□ 0.12
CHD3-205ENST00000449744 SUN2Q9UH99 717 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 XPO7Q9UIA9 1087 aaKnown RBP15.82■□□□□ 0.12
CHD3-205ENST00000449744 SLC6A14Q9UN76 642 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 FHOD1Q9Y613 1164 aa15.82■□□□□ 0.12
CHD3-205ENST00000449744 TNRC6BQ9UPQ9 1833 aaKnown RBP15.82■□□□□ 0.12
CHD3-205ENST00000449744 MEI4A8MW99 385 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 KCNU1A8MYU2 1149 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 CDX4O14627 284 aaPredicted RBP15.81■□□□□ 0.12
CHD3-205ENST00000449744 LUC7L3O95232 432 aaKnown RBP15.81■□□□□ 0.12
CHD3-205ENST00000449744 ASLP04424 464 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 ERBB2P04626 1255 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 GNSP15586 552 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 CCR1P32246 355 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 MAPK8P45983 427 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 PITX1P78337 314 aaPredicted RBP15.81■□□□□ 0.12
CHD3-205ENST00000449744 SLC6A3Q01959 620 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 CAMK2GQ13555 558 aaPredicted RBP15.81■□□□□ 0.12
CHD3-205ENST00000449744 PTPRNQ16849 979 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 PTPN20Q4JDL3 420 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 OLFML1Q6UWY5 402 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 ZDHHC17Q8IUH5 632 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms