RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 MAGEB5Q9BZ81 275 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 LMAN2LQ9H0V9 348 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 NKX2-4Q9H2Z4 354 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 TLE6Q9H808 572 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 CERS4Q9HA82 394 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 MAN1C1Q9NR34 630 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 PAK5Q9P286 719 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 LSM7Q9UK45 103 aaKnown RBP9.99□□□□□ -0.81
RFC4-210ENST00000449502 HS3ST4Q9Y661 456 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 MICAL3Q7RTP6 2002 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 LTBP2Q14767 1821 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 TYW5A2RUC4 315 aaKnown RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 F5H5T6 163 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 FAM72CH0Y354 149 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 DCLK1O15075 740 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 MTSS1O43312 755 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 CLASP2O75122 1294 aaKnown RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 SEC31AO94979 1220 aaKnown RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 MAP3K6O95382 1288 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 HNRNPA1P09651 372 aaKnown RBP eCLIP9.98□□□□□ -0.81
RFC4-210ENST00000449502 IRF1P10914 325 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 RHOQP17081 205 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 HDCP19113 662 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 DNAJB1P25685 340 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 GGCXP38435 758 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 RPL21P46778 160 aaKnown RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 LMAN1P49257 510 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 CLCN4P51793 760 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 MLLT6P55198 1093 aaPredicted RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 NRG1Q02297 640 aaPredicted RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 EIF4EBP2Q13542 120 aaPredicted RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 RABGAP1LQ5R372 815 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 BEND6Q5SZJ8 279 aaPredicted RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 FAM72AQ5TYM5 149 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 RAP1GAP2Q684P5 730 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 FAM72DQ6L9T8 149 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 ARHGEF18Q6ZSZ5 1173 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 FAM72BQ86X60 149 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 ZNF354CQ86Y25 554 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 TTC16Q8NEE8 873 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 AENQ8WTP8 325 aaKnown RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 SEC14L1Q92503 715 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 GDAP1L1Q96MZ0 367 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 RPRD1AQ96P16 312 aaPredicted RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 QKIQ96PU8 341 aaKnown RBP eCLIP9.98□□□□□ -0.81
RFC4-210ENST00000449502 RUFY1Q96T51 708 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 ZYG11BQ9C0D3 744 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 PIDD1Q9HB75 910 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 ANLNQ9NQW6 1124 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 DTLQ9NZJ0 730 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 SEPT10Q9P0V9 454 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 VANGL2Q9ULK5 521 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 TPX2Q9ULW0 747 aaKnown RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 YBX2Q9Y2T7 364 aaKnown RBP9.98□□□□□ -0.81
RFC4-210ENST00000449502 COL4A6Q14031 1691 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 TSC2P49815 1807 aa9.98□□□□□ -0.81
RFC4-210ENST00000449502 KIAA0100Q14667 2235 aaKnown RBP9.97□□□□□ -0.81
RFC4-210ENST00000449502 C2orf78A6NCI8 922 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 E7EVH7 732 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 SMAPO00193 183 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 DFFAO00273 331 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 ZNF197O14709 1029 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 MFSD11O43934 449 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 ACSL4O60488 711 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 ARHGEF15O94989 841 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 IGLV3-27P01718 113 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 F11P03951 625 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 CKMP06732 381 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 ZSCAN5DPP0CG00 497 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 ETS1P14921 441 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 PTPN2P17706 415 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 PFKLP17858 780 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 DDX6P26196 483 aaKnown RBP eCLIP9.97□□□□□ -0.81
RFC4-210ENST00000449502 RBL1P28749 1068 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 CORO1AP31146 461 aaKnown RBP9.97□□□□□ -0.81
RFC4-210ENST00000449502 HOXA9P31269 272 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 IRS1P35568 1242 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 PBX2P40425 430 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 ITGA8P53708 1063 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 BASP1P80723 227 aaKnown RBP9.97□□□□□ -0.81
RFC4-210ENST00000449502 SMAD3P84022 425 aaKnown RBP9.97□□□□□ -0.81
RFC4-210ENST00000449502 SEMA3BQ13214 749 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 AUHQ13825 339 aaKnown RBP9.97□□□□□ -0.81
RFC4-210ENST00000449502 SLMAPQ14BN4 828 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 P3H1Q32P28 736 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 MS4A13Q5J8X5 152 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 B4GALNT4Q76KP1 1039 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 RBM23Q86U06 439 aaKnown RBP9.97□□□□□ -0.81
RFC4-210ENST00000449502 HS6ST3Q8IZP7 471 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 LGI2Q8N0V4 545 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 ATPAF2Q8N5M1 289 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 ARL14EPQ8N8R7 260 aaPredicted RBP9.97□□□□□ -0.81
RFC4-210ENST00000449502 RTL3Q8N8U3 475 aaKnown RBP9.97□□□□□ -0.81
RFC4-210ENST00000449502 SLC22A17Q8WUG5 538 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 NSMCE1Q8WV22 266 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 HTR3CQ8WXA8 447 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 ART4Q93070 314 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 CAVIN3Q969G5 261 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 PBX4Q9BYU1 374 aa9.97□□□□□ -0.81
RFC4-210ENST00000449502 KLC2Q9H0B6 622 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms