RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 FCHO2Q0JRZ9 810 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 KRT81Q14533 505 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 EML3Q32P44 896 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 FBXL22Q6P050 247 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 TPGS1Q6ZTW0 290 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 CIR1Q86X95 450 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 PSTKQ8IV42 348 aaKnown RBP18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 FAM217AQ8IXS0 508 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 ZNF683Q8IZ20 524 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 KCTD6Q8NC69 237 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 ATXN2LQ8WWM7 1075 aaKnown RBP18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 ALG3Q92685 438 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 BHMTQ93088 406 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 IGSF8Q969P0 613 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 P2RY11Q96G91 374 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 HES6Q96HZ4 224 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 PRICKLE1Q96MT3 831 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 DDX50Q9BQ39 737 aaKnown RBP18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 TRMT61BQ9BVS5 477 aaKnown RBP18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 EBF3Q9H4W6 596 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 COL4A3Q01955 1670 aa18.59■□□□□ 0.57
TRAPPC4-203ENST00000447216 CCDC66A2RUB6 948 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 LRRD1A4D1F6 860 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 GFRA2O00451 464 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 LRIG2O94898 1065 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 BMP1P13497 986 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 PEX5P50542 639 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 RPS24P62847 133 aaKnown RBP18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 TNK2Q07912 1038 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 MMRN1Q13201 1228 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 SEMA3BQ13214 749 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 RPS6KA1Q15418 735 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 DPYSL2Q16555 572 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 MANEALQ5VSG8 457 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 TMEM25Q86YD3 366 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 KATNAL2Q8IYT4 538 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 CFAP52Q8N1V2 620 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 CPXM2Q8N436 756 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 RNF25Q96BH1 459 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 C1orf74Q96LT6 269 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 ASB2Q96Q27 587 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 FAM83CQ9BQN1 747 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 TLR10Q9BXR5 811 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 HPS4Q9NQG7 708 aa18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 DDX56Q9NY93 547 aaKnown RBP18.58■□□□□ 0.56
TRAPPC4-203ENST00000447216 COL4A2P08572 1712 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 MIF4GDA9UHW6 222 aaKnown RBP18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 EEF2KO00418 725 aaKnown RBP18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 CHADO15335 359 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 ATP1A1P05023 1023 aaKnown RBP18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 CYP17A1P05093 508 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 GOT1P17174 413 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 KDELR1P24390 212 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 MTA1Q13330 715 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 DPYSL3Q14195 570 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 PDGFRLQ15198 375 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 LLGL1Q15334 1064 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 LY6G5CQ5SRR4 150 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 RWDD4Q6NW29 188 aaKnown RBP18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 ANKS1BQ7Z6G8 1248 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 ADGRG2Q8IZP9 1017 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 SLC44A3Q8N4M1 653 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 UBL4BQ8N7F7 174 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 TTC8Q8TAM2 541 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 OTUB2Q96DC9 234 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 C16orf45Q96MC5 204 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 RPRD1AQ96P16 312 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 PSMB7Q99436 277 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 EPAS1Q99814 870 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 CALN1Q9BXU9 219 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 SPHK2Q9NRA0 654 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 PLK2Q9NYY3 685 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 MPP6Q9NZW5 540 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 CWC15Q9P013 229 aaKnown RBP18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 STIM2Q9P246 746 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 IGSF9Q9P2J2 1179 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 PRKAG3Q9UGI9 489 aa18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRAPPC4-203ENST00000447216 SHROOM3Q8TF72 1996 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 C3orf70A6NLC5 250 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 TBL1XO60907 577 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 CNTN5O94779 1100 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 MSNP26038 577 aaKnown RBP18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 CHKAP35790 457 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 RWDD2BP57060 319 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 TPI1P60174 286 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 NRG1Q02297 640 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 ZNF211Q13398 564 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 DHCR24Q15392 516 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 ODF2Q5BJF6 829 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 DCAF12L1Q5VU92 463 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 AADACL2Q6P093 401 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 RHBDF2Q6PJF5 856 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 MFSD7Q6UXD7 560 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 LRRC31Q6UY01 552 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 NYAP1Q6ZVC0 841 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 KIAA1958Q8N8K9 716 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 FAM71BQ8TC56 605 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 TSC1Q92574 1164 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 IRF7Q92985 503 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms