RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SLC26A7Q8TE54 656 aa19.61■□□□□ 0.73
SDCBP-204ENST00000447182 ISL2Q96A47 359 aa19.61■□□□□ 0.73
SDCBP-204ENST00000447182 FDXACB1Q9BRP7 624 aaPredicted RBP19.61■□□□□ 0.73
SDCBP-204ENST00000447182 ADAMTS6Q9UKP5 1117 aa19.61■□□□□ 0.73
SDCBP-204ENST00000447182 OPHN1O60890 802 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 RALBP11234 206 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 UQCRBP14927 111 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 MX2P20592 715 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 CRADDP78560 199 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 CCDC153Q494R4 210 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 CAMKK2Q96RR4 588 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 MRPL45Q9BRJ2 306 aaKnown RBP19.6■□□□□ 0.73
SDCBP-204ENST00000447182 CENPKQ9BS16 269 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 SPATA16Q9BXB7 569 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 TMEM216Q9P0N5 145 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 RCOR3Q9P2K3 495 aaPredicted RBP19.6■□□□□ 0.73
SDCBP-204ENST00000447182 POMPQ9Y244 141 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 PLXNA1Q9UIW2 1896 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 CASQ2O14958 399 aaPredicted RBP19.6■□□□□ 0.73
SDCBP-204ENST00000447182 CCDC130P13994 396 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 ITGAXP20702 1163 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 MGAT1P26572 445 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 GSTT1P30711 240 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 MAGEA12P43365 314 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 ATXN1P54253 815 aaKnown RBP19.6■□□□□ 0.73
SDCBP-204ENST00000447182 EPHB1P54762 984 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 MED21Q13503 144 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 GRM2Q14416 872 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 SFT2D3Q587I9 215 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 ZNF484Q5JVG2 852 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 ARHGAP17Q68EM7 881 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 ST13P4Q8IZP2 240 aaPredicted RBP19.6■□□□□ 0.73
SDCBP-204ENST00000447182 LINC01465Q8N7H1 131 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 MAGEB5Q9BZ81 275 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 SLC4A7Q9Y6M7 1214 aa19.6■□□□□ 0.73
SDCBP-204ENST00000447182 SF3B1O75533 1304 aaKnown RBP eCLIP19.6■□□□□ 0.731e-6■■■■■ 66.8
SDCBP-204ENST00000447182 MYO18AQ92614 2054 aaKnown RBP19.6■□□□□ 0.73
SDCBP-204ENST00000447182 RTN3O95197 1032 aaPredicted RBP19.59■□□□□ 0.73
SDCBP-204ENST00000447182 ACAT1P24752 427 aaKnown RBP19.59■□□□□ 0.73
SDCBP-204ENST00000447182 GP5P40197 560 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 RPL34P49207 117 aaKnown RBP19.59■□□□□ 0.73
SDCBP-204ENST00000447182 MSLNQ13421 630 aaPredicted RBP19.59■□□□□ 0.73
SDCBP-204ENST00000447182 MAP3K21Q5TCX8 1036 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 FBXW8Q8N3Y1 598 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 CPNE1Q99829 537 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 RNPEPQ9H4A4 650 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 DMAP1Q9NPF5 467 aaPredicted RBP19.59■□□□□ 0.73
SDCBP-204ENST00000447182 FAM49BQ9NUQ9 324 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 GGA3Q9NZ52 723 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 ADAM28Q9UKQ2 775 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 SSX2IPQ9Y2D8 614 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 NME7Q9Y5B8 376 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 PCDHB12Q9Y5F1 795 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 GJA3Q9Y6H8 435 aa19.59■□□□□ 0.73
SDCBP-204ENST00000447182 PEX1O43933 1283 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 STK10O94804 968 aaKnown RBP19.58■□□□□ 0.73
SDCBP-204ENST00000447182 CYP2C8P10632 490 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 TYK2P29597 1187 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 SCN1AP35498 2009 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 GARSP41250 739 aaKnown RBP19.58■□□□□ 0.73
SDCBP-204ENST00000447182 SESN2P58004 480 aaPredicted RBP19.58■□□□□ 0.73
SDCBP-204ENST00000447182 CNPY1Q3B7I2 92 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 FSCBQ5H9T9 825 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 GRTP1Q5TC63 336 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 RSPH3Q86UC2 560 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 DEFB107AQ8IZN7 70 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 CCDC185Q8N715 623 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 GDPD5Q8WTR4 605 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 KIF12Q96FN5 646 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 ERAP1Q9NZ08 941 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 MFHAS1Q9Y4C4 1052 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 CDY2AQ9Y6F7 541 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 CDY1Q9Y6F8 540 aa19.58■□□□□ 0.73
SDCBP-204ENST00000447182 PDE5AO76074 875 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 CPA3P15088 417 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 GOT1P17174 413 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 ARL4AP40617 200 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 GLUD2P49448 558 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 MTTPP55157 894 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 DYNC1I2Q13409 638 aaKnown RBP19.58■□□□□ 0.72
SDCBP-204ENST00000447182 DALRD3Q5D0E6 543 aaKnown RBP19.58■□□□□ 0.72
SDCBP-204ENST00000447182 PPM1JQ5JR12 505 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 RASIP1Q5U651 963 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 EPGNQ6UW88 154 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 FRMD7Q6ZUT3 714 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 STRADAQ7RTN6 431 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 KBTBD6Q86V97 674 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 UNC93AQ86WB7 457 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 LGMNQ99538 433 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 ARHGAP26Q9UNA1 814 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 PPP2R3BQ9Y5P8 575 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 NR2E3Q9Y5X4 410 aa19.58■□□□□ 0.72
SDCBP-204ENST00000447182 POLBP06746 335 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 ITGA9Q13797 1035 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 SOWAHAQ2M3V2 549 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 SPANXN3Q5MJ09 141 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 VWA5B1Q5TIE3 1220 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 METTL21CQ5VZV1 264 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 LPCAT4Q643R3 524 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 SDCCAG8Q86SQ7 713 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms