RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 RAD54BQ9Y620 910 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 USP34Q70CQ2 3546 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 TCRBV21S2A2A0A5A6 115 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 TYW5A2RUC4 315 aaKnown RBP15.35■□□□□ 0.05
HDAC4-204ENST00000446876 F5H5T6 163 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 AXIN1O15169 862 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 PAGE1O75459 146 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 CALB1P05937 261 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 SLC2A3P11169 496 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 PABPC1P11940 636 aaKnown RBP15.35■□□□□ 0.05
HDAC4-204ENST00000446876 HOXB2P14652 356 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 NTSR1P30989 418 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 CXCR3P49682 368 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 NUMBP49757 651 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 DGKEP52429 567 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 ATP11AP98196 1134 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 CDO1Q16878 200 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 C15orf59Q2T9L4 293 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-204ENST00000446876 SLC25A52Q3SY17 297 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 HSF5Q4G112 596 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-204ENST00000446876 FIGNQ5HY92 759 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 SH3PXD2AQ5TCZ1 1133 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 KIAA1211LQ6NV74 962 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 PRR23BQ6ZRT6 265 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 CHST9Q7L1S5 443 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 TRMT11Q7Z4G4 463 aaKnown RBP15.35■□□□□ 0.05
HDAC4-204ENST00000446876 C14orf80Q86SX3 495 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 MDGA1Q8NFP4 955 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 CYB5D2Q8WUJ1 264 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 RXFP2Q8WXD0 754 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 EDEM3Q9BZQ6 932 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 TKTL2Q9H0I9 626 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 EPC1Q9H2F5 836 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 ELOVL2Q9NXB9 296 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 RRN3Q9NYV6 651 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 SLC12A6Q9UHW9 1150 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 GGA2Q9UJY4 613 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 SMG5Q9UPR3 1016 aaKnown RBP15.35■□□□□ 0.05
HDAC4-204ENST00000446876 INVSQ9Y283 1065 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 HS3ST4Q9Y661 456 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 SPAG17Q6Q759 2223 aa15.35■□□□□ 0.05
HDAC4-204ENST00000446876 ZFHX2Q9C0A1 2572 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-204ENST00000446876 CKAP5Q14008 2032 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 A0A1W2PQF6 199 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 ATMINO43313 823 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-204ENST00000446876 LUC7L3O95232 432 aaKnown RBP15.34■□□□□ 0.05
HDAC4-204ENST00000446876 GYPCP04921 128 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 PRKCIP41743 596 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 IL12RB1P42701 662 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 KLHL30Q0D2K2 578 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 LMAN2Q12907 356 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 SIM2Q14190 667 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-204ENST00000446876 FUT11Q495W5 492 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 CCDC14Q49A88 953 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 FSCBQ5H9T9 825 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 MPP7Q5T2T1 576 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 ACAD10Q6JQN1 1059 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 FBXL22Q6P050 247 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 BNIPLQ7Z465 357 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 ADIPOR2Q86V24 386 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 RASSF3Q86WH2 238 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 FAM131BQ86XD5 332 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 MCOLN2Q8IZK6 566 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.34■□□□□ 0.05
HDAC4-204ENST00000446876 KCNV2Q8TDN2 545 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 HMGB4Q8WW32 186 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 IGSF8Q969P0 613 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 PGAP3Q96FM1 320 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-204ENST00000446876 LMLNQ96KR4 655 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 NUP58Q9BVL2 599 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 SELENOOQ9BVL4 669 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 SIK2Q9H0K1 926 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 SEMA4AQ9H3S1 761 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 WDCPQ9H6R7 721 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 ARHGEF38Q9NXL2 777 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 VANGL2Q9ULK5 521 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 STON1Q9Y6Q2 735 aa15.34■□□□□ 0.05
HDAC4-204ENST00000446876 GPR179Q6PRD1 2367 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 A0A1W2PQJ5 194 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 TCRBV5S1A1TA0A578 114 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 C2CD4BA6NLJ0 364 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 DDX3XO00571 662 aaKnown RBP eCLIP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 DCLK1O15075 740 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 RPP40O75818 363 aaKnown RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 KRT3P12035 628 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 PDGFRAP16234 1089 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 RRM1P23921 792 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 PRKCHP24723 683 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 SDC4P31431 198 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 RDXP35241 583 aaKnown RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 RFC1P35251 1148 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 GSCP56915 257 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 C1QBPQ07021 282 aaKnown RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 CDH18Q13634 790 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 AUHQ13825 339 aaKnown RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 ZNF234Q14588 700 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 BRMS1LQ5PSV4 323 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 MBLAC2Q68D91 279 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 DNAJC24Q6P3W2 148 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 CEP68Q76N32 757 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms