RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PIGWQ7Z7B1 504 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 CACNA2D3Q8IZS8 1091 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 PDCD7Q8N8D1 485 aaKnown RBP17.96■□□□□ 0.47
SMC6-206ENST00000446852 SLC44A1Q8WWI5 657 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 LRRC39Q96DD0 335 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 SGSM3Q96HU1 749 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 B3GALT6Q96L58 329 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 TRIM62Q9BVG3 475 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 XAB2Q9HCS7 855 aaKnown RBP17.96■□□□□ 0.47
SMC6-206ENST00000446852 ABCC13Q9NSE7 274 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 NEU3Q9UQ49 428 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 GREB1Q4ZG55 1949 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 MSI1O43347 362 aaKnown RBP17.96■□□□□ 0.47
SMC6-206ENST00000446852 CPP00450 1065 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 MYCP01106 439 aaPredicted RBP17.96■□□□□ 0.47
SMC6-206ENST00000446852 COL6A1P12109 1028 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 EPHB2P29323 1055 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 BFSP2Q13515 415 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 BTBD8Q5XKL5 378 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 UNC5AQ6ZN44 842 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 DEPDC1BQ8WUY9 529 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 CASP10Q92851 521 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 CASD1Q96PB1 797 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 SMOC2Q9H3U7 446 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 ELAC1Q9H777 363 aaKnown RBP17.96■□□□□ 0.47
SMC6-206ENST00000446852 SFMBT1Q9UHJ3 866 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 NUDT5Q9UKK9 219 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 SMG5Q9UPR3 1016 aaKnown RBP17.96■□□□□ 0.47
SMC6-206ENST00000446852 ATXN2Q99700 1313 aaKnown RBP17.95■□□□□ 0.46
SMC6-206ENST00000446852 ASMTLO95671 621 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 SLC18A1P54219 525 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 CORO7P57737 925 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 PPIDQ08752 370 aaKnown RBP17.95■□□□□ 0.46
SMC6-206ENST00000446852 SF3A3Q12874 501 aaKnown RBP eCLIP17.95■□□□□ 0.462e-10■■■■□ 21.6
SMC6-206ENST00000446852 IFT88Q13099 833 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 DDR2Q16832 855 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 DCP1BQ8IZD4 617 aaKnown RBP17.95■□□□□ 0.46
SMC6-206ENST00000446852 ABI1Q8IZP0 508 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 PGLYRP2Q96PD5 576 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 EBNA1BP2Q99848 306 aaKnown RBP17.95■□□□□ 0.46
SMC6-206ENST00000446852 GPR62Q9BZJ7 368 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 FGFR1OP2Q9NVK5 253 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 OSER1Q9NX31 292 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 ARHGEF38Q9NXL2 777 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 ADAM28Q9UKQ2 775 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 TRIM17Q9Y577 477 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 PCDHB7Q9Y5E2 793 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 RAD54BQ9Y620 910 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 MAD1L1Q9Y6D9 718 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 CXorf49A8MYA2 514 aaPredicted RBP17.95■□□□□ 0.46
SMC6-206ENST00000446852 MYO1CO00159 1063 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 DNM1LO00429 736 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 CA4P22748 312 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 PTPN3P26045 913 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 PRMT2P55345 433 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 MICALCLQ6ZW33 695 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 PDZD4Q76G19 769 aaPredicted RBP17.95■□□□□ 0.46
SMC6-206ENST00000446852 CEP57Q86XR8 500 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 TTC9BQ8N6N2 239 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 FERMT1Q9BQL6 677 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 EIF2B3Q9NR50 452 aaKnown RBP17.95■□□□□ 0.46
SMC6-206ENST00000446852 SMYD2Q9NRG4 433 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 GRID1Q9ULK0 1009 aa17.95■□□□□ 0.46
SMC6-206ENST00000446852 A0A1W2PQH9 124 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 SYN3O14994 580 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 APOEP02649 317 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 PRKCHP24723 683 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 FOXN2P32314 431 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 CDK16Q00536 496 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 FAM171A1Q5VUB5 890 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 FUBP3Q96I24 572 aaKnown RBP eCLIP17.94■□□□□ 0.46
SMC6-206ENST00000446852 CABS1Q96KC9 395 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 MAGEB18Q96M61 343 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 TGS1Q96RS0 853 aaKnown RBP17.94■□□□□ 0.46
SMC6-206ENST00000446852 GORASP1Q9BQQ3 440 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 OSBPL2Q9H1P3 480 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 PIH1D1Q9NWS0 290 aaKnown RBP17.94■□□□□ 0.46
SMC6-206ENST00000446852 MARCH5Q9NX47 278 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 FAM155BO75949 473 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 ZNF135P52742 658 aaPredicted RBP17.94■□□□□ 0.46
SMC6-206ENST00000446852 FAAP100Q0VG06 881 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 GALNT2Q10471 571 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 SLC1A5Q15758 541 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 NFE2Q16621 373 aaPredicted RBP17.94■□□□□ 0.46
SMC6-206ENST00000446852 PARP6Q2NL67 630 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 TRMT10BQ6PF06 316 aaKnown RBP17.94■□□□□ 0.46
SMC6-206ENST00000446852 KLF6Q99612 283 aaPredicted RBP17.94■□□□□ 0.46
SMC6-206ENST00000446852 ELAC2Q9BQ52 826 aaKnown RBP17.94■□□□□ 0.46
SMC6-206ENST00000446852 SIK2Q9H0K1 926 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 IGSF9Q9P2J2 1179 aa17.94■□□□□ 0.46
SMC6-206ENST00000446852 NYNRINQ9P2P1 1898 aaKnown RBP17.94■□□□□ 0.46
SMC6-206ENST00000446852 GOLGA8RI6L899 631 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 NCAM2O15394 837 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 INHBAP08476 426 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 SRGAP2BP0DMP2 458 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 GARSP41250 739 aaKnown RBP17.93■□□□□ 0.46
SMC6-206ENST00000446852 USP46P62068 366 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 CRADDP78560 199 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 MRPL58Q14197 206 aaKnown RBP17.93■□□□□ 0.46
SMC6-206ENST00000446852 ARHGEF6Q15052 776 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms