RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 RNF187Q5TA31 235 aaPredicted RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 PRPF39Q86UA1 669 aaKnown RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 NPWQ8N729 165 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 ATAD1Q8NBU5 361 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 CELF6Q96J87 481 aaKnown RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 AGAP3Q96P47 875 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 KLF6Q99612 283 aaPredicted RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 TRIM62Q9BVG3 475 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 FRMD8Q9BZ67 464 aaPredicted RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 GPR62Q9BZJ7 368 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 PNPLA8Q9NP80 782 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 KLHL8Q9P2G9 620 aaPredicted RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 ADAM28Q9UKQ2 775 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 SLC27A5Q9Y2P5 690 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 ACTL7BQ9Y614 415 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 TBKBP1A7MCY6 615 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 TNFRSF10BO14763 440 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 FAM155BO75949 473 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 UPP2O95045 317 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 INHBAP08476 426 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 CA4P22748 312 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 PSMB4P28070 264 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 RPA3P35244 121 aaPredicted RBP9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 FDFT1P37268 417 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 GLUD2P49448 558 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 SESN2P58004 480 aaPredicted RBP9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 CRADDP78560 199 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 WASHC5Q12768 1159 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 SEMA3BQ13214 749 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 SEMA5AQ13591 1074 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 SPARCL1Q14515 664 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 TCTN1Q2MV58 587 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 ADGRD1Q6QNK2 874 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 MICALCLQ6ZW33 695 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 DEFB128Q7Z7B8 93 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 SCD5Q86SK9 330 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 CACNA2D3Q8IZS8 1091 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 ZNF567Q8N184 647 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 NUP93Q8N1F7 819 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 TTC9BQ8N6N2 239 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 PPM1NQ8N819 430 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 MCUQ8NE86 351 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 DCAKDQ8WVC6 231 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 PPM1EQ8WY54 764 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 CASP10Q92851 521 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 CABS1Q96KC9 395 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 CASD1Q96PB1 797 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 ELAC2Q9BQ52 826 aaKnown RBP9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 PPP1R12CQ9BZL4 782 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 RNF208Q9H0X6 261 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 PPCSQ9HAB8 311 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 NMUR1Q9HB89 426 aa9.8□□□□□ -0.84
COL6A4P1-201ENST00000446690 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 TMEM189-UBE2V1I3L0A0 370 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 OPHN1O60890 802 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 KIAA0754O94854 1291 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 CPB1P15086 417 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 TSHRP16473 764 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 TPSB2P20231 275 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 MAGEA6P43360 314 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 HCAR3P49019 387 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 PRMT2P55345 433 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 TPSAB1Q15661 275 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 SEPT7Q16181 437 aaKnown RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 NFE2Q16621 373 aaPredicted RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 NUGGCQ68CJ6 796 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 ZNF534Q76KX8 674 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 MYCBPQ99417 103 aaPredicted RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 PCDHB5Q9Y5E4 795 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 TDRD15B5MCY1 1934 aaKnown RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 WDR27A2RRH5 827 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 DFFAO00273 331 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 SYN3O14994 580 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 IRAK2O43187 625 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 PAGE1O75459 146 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 SF3B1O75533 1304 aaKnown RBP eCLIP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 MT-ND3P03897 115 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 CCR1P32246 355 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 SLC11A1P49279 550 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 USP46P62068 366 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 ZKSCAN8Q15776 578 aaPredicted RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 PARP6Q2NL67 630 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 MGAT5BQ3V5L5 792 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 UNC5AQ6ZN44 842 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 SCML4Q8N228 414 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 CKAP2Q8WWK9 683 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 SIGLEC10Q96LC7 697 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 TGS1Q96RS0 853 aaKnown RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 SEPT5Q99719 369 aaPredicted RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 EBNA1BP2Q99848 306 aaKnown RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 ELAC1Q9H777 363 aaKnown RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 XAB2Q9HCS7 855 aaKnown RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 OSER1Q9NX31 292 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 SENP1Q9P0U3 644 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 SAMD15Q9P1V8 674 aa9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 MAGED2Q9UNF1 606 aaPredicted RBP9.79□□□□□ -0.84
COL6A4P1-201ENST00000446690 IQANK1A0A1B0GTG1 560 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 CXorf49A8MYA2 514 aaPredicted RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 NCAM2O15394 837 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms