RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 LRIG3Q6UXM1 1119 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 ZNF365Q70YC5 407 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 BEND5Q7L4P6 421 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 SCD5Q86SK9 330 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 TAC4Q86UU9 113 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 PSTKQ8IV42 348 aaKnown RBP9.06□□□□□ -0.96
LINC00578-204ENST00000446548 MAP7D3Q8IWC1 876 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 UNC45BQ8IWX7 931 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 RNF168Q8IYW5 571 aaPredicted RBP9.06□□□□□ -0.96
LINC00578-204ENST00000446548 TTC9BQ8N6N2 239 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 CCDC89Q8N998 374 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 STKLD1Q8NE28 680 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 SLC7A14Q8TBB6 771 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 DQX1Q8TE96 717 aaKnown RBP9.06□□□□□ -0.96
LINC00578-204ENST00000446548 EDEM1Q92611 657 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 NTAN1Q96AB6 310 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 TRIM43Q96BQ3 446 aaPredicted RBP9.06□□□□□ -0.96
LINC00578-204ENST00000446548 FUBP3Q96I24 572 aaKnown RBP eCLIP9.06□□□□□ -0.96
LINC00578-204ENST00000446548 C8orf48Q96LL4 319 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 CSPG4P5Q96PW8 444 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 SLC9A7Q96T83 725 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 TMEM121Q9BTD3 319 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 RC3H2Q9HBD1 1191 aaKnown RBP9.06□□□□□ -0.96
LINC00578-204ENST00000446548 MED4Q9NPJ6 270 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 ENAMQ9NRM1 1142 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 ABI2Q9NYB9 513 aaPredicted RBP9.06□□□□□ -0.96
LINC00578-204ENST00000446548 RRN3Q9NYV6 651 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 CWC15Q9P013 229 aaKnown RBP9.06□□□□□ -0.96
LINC00578-204ENST00000446548 NOVA2Q9UNW9 492 aaKnown RBP9.06□□□□□ -0.96
LINC00578-204ENST00000446548 PLAAQ9Y263 795 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 HCN4Q9Y3Q4 1203 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 MFHAS1Q9Y4C4 1052 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 PCDHB5Q9Y5E4 795 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 OBSL1O75147 1896 aa9.06□□□□□ -0.96
LINC00578-204ENST00000446548 SHROOM3Q8TF72 1996 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 PLXNA4Q9HCM2 1894 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 SYNJ2BP-COX16A0A087WUM0 186 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 MTMR11A4FU01 709 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 CAPN9O14815 690 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 KHNYNO15037 678 aaKnown RBP9.05□□□□□ -0.96
LINC00578-204ENST00000446548 KIAA0355O15063 1070 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 TIMP1P01033 207 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 RBP3P10745 1247 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 BMP4P12644 408 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 NCAM1P13591 858 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 GOT1P17174 413 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 IGFBP4P22692 258 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 GRIK1P39086 918 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 ADCY8P40145 1251 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 CXCR3P49682 368 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 PMS2P54278 862 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 DEFB103AP81534 67 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 CAV1Q03135 178 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 ELAVL2Q12926 359 aaKnown RBP9.05□□□□□ -0.96
LINC00578-204ENST00000446548 CALCOCO2Q13137 446 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 GPS2Q13227 327 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 NME3Q13232 169 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 P3H1Q32P28 736 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 SAMD5Q5TGI4 173 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 SDHAF4Q5VUM1 108 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 BSPRYQ5W0U4 402 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 NCBP2-AS2Q69YL0 99 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 VSTM1Q6UX27 236 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 B4GALNT4Q76KP1 1039 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 GSTA5Q7RTV2 222 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 CEP57Q86XR8 500 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 SCN4BQ8IWT1 228 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 CCHCR1Q8TD31 782 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.05□□□□□ -0.96
LINC00578-204ENST00000446548 RNF139Q8WU17 664 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 UBLCP1Q8WVY7 318 aaPredicted RBP9.05□□□□□ -0.96
LINC00578-204ENST00000446548 ZNF689Q96CS4 500 aaPredicted RBP9.05□□□□□ -0.96
LINC00578-204ENST00000446548 PWWP2AQ96N64 755 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 MAK16Q9BXY0 300 aaKnown RBP9.05□□□□□ -0.96
LINC00578-204ENST00000446548 PHACTR1Q9C0D0 580 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 NMUR1Q9HB89 426 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 LRRC4CQ9HCJ2 640 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 NDFIP2Q9NV92 336 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 ETNK2Q9NVF9 386 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 IL37Q9NZH6 218 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 COX16Q9P0S2 106 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 RCOR3Q9P2K3 495 aaPredicted RBP9.05□□□□□ -0.96
LINC00578-204ENST00000446548 MTRF1LQ9UGC7 380 aaKnown RBP9.05□□□□□ -0.96
LINC00578-204ENST00000446548 ANAPC5Q9UJX4 755 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 FBXW11Q9UKB1 542 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 ATP8A1Q9Y2Q0 1164 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 ANAPC1Q9H1A4 1944 aa9.05□□□□□ -0.96
LINC00578-204ENST00000446548 DOCK4Q8N1I0 1966 aa9.04□□□□□ -0.96
LINC00578-204ENST00000446548 NYNRINQ9P2P1 1898 aaKnown RBP9.04□□□□□ -0.96
LINC00578-204ENST00000446548 ABHD14A-ACY1A0A1B0GW23 586 aa9.04□□□□□ -0.96
LINC00578-204ENST00000446548 A0A1W2PQH9 124 aa9.04□□□□□ -0.96
LINC00578-204ENST00000446548 BCLAF3A2AJT9 711 aaKnown RBP9.04□□□□□ -0.96
LINC00578-204ENST00000446548 DCDC2BA2VCK2 349 aa9.04□□□□□ -0.96
LINC00578-204ENST00000446548 FAM72CH0Y354 149 aa9.04□□□□□ -0.96
LINC00578-204ENST00000446548 H7C4K7 107 aa9.04□□□□□ -0.96
LINC00578-204ENST00000446548 SGK1O00141 431 aa9.04□□□□□ -0.96
LINC00578-204ENST00000446548 POLR3GO15318 223 aaPredicted RBP9.04□□□□□ -0.96
LINC00578-204ENST00000446548 ADAM12O43184 909 aa9.04□□□□□ -0.96
LINC00578-204ENST00000446548 AMPD1P23109 780 aa9.04□□□□□ -0.96
LINC00578-204ENST00000446548 RPL22P35268 128 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms