RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	PDPK2P	Q6A1A2	396 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	MOB2	Q70IA6	237 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	CCDC185	Q8N715	623 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	ZNF781	Q8N8C0	355 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	OR6Y1	Q8NGX8	325 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	MAPK15	Q8TD08	544 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	TMEM176A	Q96HP8	235 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	ABHD8	Q96I13	439 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	MPP4	Q96JB8	637 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	OR52B2	Q96RD2	323 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	NUF2	Q9BZD4	464 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	RSAD1	Q9HA92	442 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	NRBP2	Q9NSY0	501 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	ARHGEF38	Q9NXL2	777 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	UTP6	Q9NYH9	597 aa	Known RBP	12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	KIF13B	Q9NQT8	1826 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	TRIP11	Q15643	1979 aa		12.89	□□□□□ -0.35
DDR1-238	ENST00000446312	ARL2	P36404	184 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	ZNF132	P52740	706 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	COPA	P53621	1224 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	PDE1C	Q14123	709 aa	Predicted RBP	12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	CCDC14	Q49A88	953 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	TREML2	Q5T2D2	321 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	C6orf52	Q5T4I8	152 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	MAVS	Q7Z434	540 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	ALKBH8	Q96BT7	664 aa	Known RBP	12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	ZMAT2	Q96NC0	199 aa	Known RBP	12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	KLHL4	Q9C0H6	718 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	CDT1	Q9H211	546 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	XPNPEP3	Q9NQH7	507 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	NUP205	Q92621	2012 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	TMEM233	B4DJY2	109 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	PSMB4	P28070	264 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	OCRL	Q01968	901 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	LGSN	Q5TDP6	509 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	NIPA1	Q7RTP0	329 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	WDR49	Q8IV35	697 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	ZNF280C	Q8ND82	737 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	GATA6	Q92908	595 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	KIF12	Q96FN5	646 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	MRPL45	Q9BRJ2	306 aa	Known RBP	12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	TIPIN	Q9BVW5	301 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	ATXN3L	Q9H3M9	355 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	PCDH18	Q9HCL0	1135 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	PTPRH	Q9HD43	1115 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	SOX13	Q9UN79	622 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	TRAFD1	O14545	582 aa	Predicted RBP	12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	ABLIM1	O14639	778 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	LTF	P02788	710 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	IL4R	P24394	825 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	ACAT1	P24752	427 aa	Known RBP	12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	SNRPF	P62306	86 aa	Known RBP	12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	DMPK	Q09013	629 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	HSP90AA5P	Q58FG0	334 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	ZNF618	Q5T7W0	954 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	HEATR6	Q6AI08	1181 aa	Known RBP	12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	ZNF280D	Q6N043	979 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	PID1	Q7Z2X4	250 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	SMYD1	Q8NB12	490 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	ZNF669	Q96BR6	464 aa	Predicted RBP	12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	SLC45A3	Q96JT2	553 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	TEX13B	Q9BXU2	312 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	GOLGA2P5	Q9HBQ8	144 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	PFDN4	Q9NQP4	134 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	SYBU	Q9NX95	663 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	ITM2B	Q9Y287	266 aa		12.88	□□□□□ -0.35
DDR1-238	ENST00000446312	PDLIM1	O00151	329 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	PLSCR1	O15162	318 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	ZBTB14	O43829	449 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	ALDOA	P04075	364 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	GSTA2	P09210	222 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	MPST	P25325	297 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	NFKBIA	P25963	317 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	PLK1	P53350	603 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	ACTR3	P61158	418 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	FBXL19	Q6PCT2	694 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	SNX32	Q86XE0	403 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	PCDH20	Q8N6Y1	951 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	OR52K1	Q8NGK4	314 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	SPATA33	Q96N06	139 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	PRPF18	Q99633	342 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	DHRS4	Q9BTZ2	278 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	MRI	Q9BWK5	157 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	TLE6	Q9H808	572 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	CNTN3	Q9P232	1028 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	CAPN14	A8MX76	684 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	TBC1D12	O60347	775 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	TPST1	O60507	370 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	DHRS4L1	P0CG22	281 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	GPD2	P43304	727 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	SLC18A2	Q05940	514 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	CCNI	Q14094	377 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	PITRM1	Q5JRX3	1037 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	TEDDM1	Q5T9Z0	273 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	CYP2R1	Q6VVX0	501 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	GRIN3A	Q8TCU5	1115 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	LPAR1	Q92633	364 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	C18orf25	Q96B23	403 aa	Predicted RBP	12.87	□□□□□ -0.35

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