RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 BTKQ06187 659 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 POU6F1Q14863 301 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 LCLAT1Q6UWP7 414 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 RIPOR1Q6ZS17 1223 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 TSHZ1Q6ZSZ6 1077 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 TUBGCP3Q96CW5 907 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 CATSPER2Q96P56 530 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 ASPSCR1Q9BZE9 553 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 IL22Q9GZX6 179 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 TBC1D13Q9NVG8 400 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 HACD3Q9P035 362 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 ABLIM1O14639 778 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 SOAT2O75908 522 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 RHOBTB1O94844 696 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 HMBSP08397 361 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 ACAT1P24752 427 aaKnown RBP17.02■□□□□ 0.32
TCOF1-206ENST00000445265 PLOD1Q02809 727 aaPredicted RBP17.02■□□□□ 0.32
TCOF1-206ENST00000445265 TMTC4Q5T4D3 741 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 PLEKHH3Q7Z736 793 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 CHSY1Q86X52 802 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 KIAA0319LQ8IZA0 1049 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 CACYBPQ9HB71 228 aaKnown RBP17.02■□□□□ 0.32
TCOF1-206ENST00000445265 RBM22Q9NW64 420 aaKnown RBP eCLIP17.02■□□□□ 0.324e-6■■■■□ 24.3
TCOF1-206ENST00000445265 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.02■□□□□ 0.32
TCOF1-206ENST00000445265 BNIP3LO60238 219 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 CILPO75339 1184 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 RECQL4O94761 1208 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 BPGMP07738 259 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 CAPRIN1Q14444 709 aaKnown RBP17.02■□□□□ 0.32
TCOF1-206ENST00000445265 KRT72Q14CN4 511 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 TTC33Q6PID6 262 aaPredicted RBP17.02■□□□□ 0.32
TCOF1-206ENST00000445265 LZTR1Q8N653 840 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 LMO3Q8TAP4 145 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 FZD1Q9UP38 647 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 SLC30A1Q9Y6M5 507 aa17.02■□□□□ 0.32
TCOF1-206ENST00000445265 TADA2AO75478 443 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 FOXN2P32314 431 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 SLC25A3Q00325 362 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 VGLL4Q14135 290 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 TAF1CQ15572 869 aaPredicted RBP17.02■□□□□ 0.31
TCOF1-206ENST00000445265 AGKQ53H12 422 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 ANKRD22Q5VYY1 191 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 IL31Q6EBC2 164 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 TMC7Q7Z402 723 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 BLOC1S6Q9UL45 172 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 hCG_2014768A0A024R1R8 64 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 ZBBXA8MT70 800 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 USP12O75317 370 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 ITGA2BP08514 1039 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 CYP2B6P20813 491 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 PTPN7P35236 360 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 SLC18A1P54219 525 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 WDR4P57081 412 aaKnown RBP17.02■□□□□ 0.31
TCOF1-206ENST00000445265 CRADDP78560 199 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 PYDC1Q8WXC3 89 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 CELF6Q96J87 481 aaKnown RBP17.02■□□□□ 0.31
TCOF1-206ENST00000445265 C7orf26Q96N11 449 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 DDX50Q9BQ39 737 aaKnown RBP17.02■□□□□ 0.31
TCOF1-206ENST00000445265 ZNF180Q9UJW8 692 aa17.02■□□□□ 0.31
TCOF1-206ENST00000445265 HEATR9A2RTY3 570 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 TTC36A6NLP5 189 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 RPL14P50914 215 aaKnown RBP17.01■□□□□ 0.31
TCOF1-206ENST00000445265 TMCO4Q5TGY1 634 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 ALYREFQ86V81 257 aaKnown RBP17.01■□□□□ 0.31
TCOF1-206ENST00000445265 CLEC4FQ8N1N0 589 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 PLEKHO2Q8TD55 490 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 COPS5Q92905 334 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 CDRT15Q96T59 188 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 APBA2Q99767 749 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 CD274Q9NZQ7 290 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 DSEQ9UL01 958 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 CHKBQ9Y259 395 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 ANPEPP15144 967 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 YBX3P16989 372 aaKnown RBP eCLIP17.01■□□□□ 0.319e-6■□□□□ 10.4
TCOF1-206ENST00000445265 GTF2A2P52657 109 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 ILF2Q12905 390 aaKnown RBP17.01■□□□□ 0.31
TCOF1-206ENST00000445265 GNASQ5JWF2 1037 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 UNC5AQ6ZN44 842 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 AMIGO3Q86WK7 504 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 ULK2Q8IYT8 1036 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 OR52K1Q8NGK4 314 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 CD101Q93033 1021 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 MECRQ9BV79 373 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 PRDM12Q9H4Q4 367 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 KANSL1LA0AUZ9 987 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 PIGNO95427 931 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 VNN1O95497 513 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 TPSB2P20231 275 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 ETFBP38117 255 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 TPSAB1Q15661 275 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 LRRC52Q8N7C0 313 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 PLD5Q8N7P1 536 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 ZNF516Q92618 1163 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 USP13Q92995 863 aaPredicted RBP17.01■□□□□ 0.31
TCOF1-206ENST00000445265 NMUR2Q9GZQ4 415 aa17.01■□□□□ 0.31
TCOF1-206ENST00000445265 BCLAF3A2AJT9 711 aaKnown RBP17■□□□□ 0.31
TCOF1-206ENST00000445265 VAPBO95292 243 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 FAM58BPP0C7Q3 252 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 AAGABQ6PD74 315 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 IYDQ6PHW0 289 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms