RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 FOXP4Q8IVH2 680 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 BBS7Q8IWZ6 715 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ALLCQ8N6M5 410 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ZNF366Q8N895 744 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PCYOX1LQ8NBM8 494 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TSPAN14Q8NG11 270 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 OR8K3Q8NH51 312 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CKAP2Q8WWK9 683 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AKAP1Q92667 903 aaKnown RBP eCLIP2.85□□□□□ -1.95
LIG4-203ENST00000442234 FAM149B1Q96BN6 582 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RILPQ96NA2 401 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CDK5RAP1Q96SZ6 601 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 TRIM51Q9BSJ1 452 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CELF4Q9BZC1 486 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 HIPK3Q9H422 1215 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SMARCAD1Q9H4L7 1026 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 NTN4Q9HB63 628 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 S100A14Q9HCY8 104 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SAR1AQ9NR31 198 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MAN1C1Q9NR34 630 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RNF19AQ9NV58 838 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TOR4AQ9NXH8 423 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.85□□□□□ -1.958e-7■■■■■ 73.7
LIG4-203ENST00000442234 CXXC1Q9P0U4 656 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 PARP2Q9UGN5 583 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ARMCX3Q9UH62 379 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 NOSIPQ9Y314 301 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 MAP4K5Q9Y4K4 846 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TEP1Q99973 2627 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 FRMPD2Q68DX3 1309 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 WDR19Q8NEZ3 1342 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SIGLEC16A6NMB1 481 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 C12orf71A8MTZ7 269 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RNF223E7ERA6 249 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PYCARD-AS1I3L0S3 204 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PSMA7O14818 248 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ATP2A1O14983 1001 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AREL1O15033 823 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AXIN1O15169 862 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PDPK1O15530 556 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CCNKO75909 580 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ALX3O95076 343 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 NADKO95544 446 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 FGBP02675 491 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 IFNA16P05015 189 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PCCAP05165 728 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 TFAP2AP05549 437 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 IGKV5-2P06315 115 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RBP3P10745 1247 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 IFI30P13284 250 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PRKCAP17252 672 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CDH2P19022 906 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 CA4P22748 312 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CASP1P29466 404 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CDK9P50750 372 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 ARHGDIAP52565 204 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MAPK10P53779 464 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RCAN1P53805 252 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MLLT6P55198 1093 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 FPGSQ05932 587 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 GALNT1Q10472 559 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 SQLEQ14534 574 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TMED2Q15363 201 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 KCTD19Q17RG1 926 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 GEN1Q17RS7 908 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 DNAL1Q4LDG9 190 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 C4orf46Q504U0 113 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 HERC4Q5GLZ8 1057 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 TMEM67Q5HYA8 995 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FAM83BQ5T0W9 1011 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FAM205BPQ63HN1 556 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SHC4Q6S5L8 630 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SLC30A10Q6XR72 485 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PRR23BQ6ZRT6 265 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ZNF410Q86VK4 478 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 HORMAD1Q86X24 394 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 DCP2Q8IU60 420 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 LURAP1LQ8IV03 231 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MB21D1Q8N884 522 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MINDY2Q8NBR6 621 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 NEDD1Q8NHV4 660 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SPATA18Q8TC71 538 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 HCAR2Q8TDS4 363 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ACTRT2Q8TDY3 377 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MAP4K1Q92918 833 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 EEF2KMTQ96G04 330 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CEP170P1Q96L14 293 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RBM14Q96PK6 669 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 MMP19Q99542 508 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TUBA1CQ9BQE3 449 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TSEN34Q9BSV6 310 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 APOL6Q9BWW8 343 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TLR10Q9BXR5 811 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MKRN2Q9H000 416 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 CCDC134Q9H6E4 229 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TXNRD2Q9NNW7 524 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FAM105AQ9NUU6 356 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 POLR3BQ9NW08 1133 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 SYBUQ9NX95 663 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms