RNA–Protein interactions for RNA: ENST00000437679.3

LIMS3-201, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LIMS3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-201ENST00000437679 CFAP54Q96N23 3096 aa15.74■□□□□ 0.11
LIMS3-201ENST00000437679 ABCA7Q8IZY2 2146 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 A0A1W2PQF6 199 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 WASH3PC4AMC7 463 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 DCLK1O15075 740 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 LRP3O75074 770 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 FERP16591 822 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 SULT1E1P49888 294 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 SPEM2Q0P670 501 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 CDH18Q13634 790 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 ZNF234Q14588 700 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 PLK5Q496M5 336 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 TMEM215Q68D42 235 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 RNF43Q68DV7 783 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 CFAP52Q8N1V2 620 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 CARNMT1Q8N4J0 409 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 OLIG1Q8TAK6 271 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 FIBINQ8TAL6 211 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 NPY6RQ99463 290 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 SEPT11Q9NVA2 429 aaKnown RBP15.73■□□□□ 0.11
LIMS3-201ENST00000437679 USP18Q9UMW8 372 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 PLA2G4CQ9UP65 541 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 PAXBP1Q9Y5B6 917 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 RAD54BQ9Y620 910 aa15.73■□□□□ 0.11
LIMS3-201ENST00000437679 A0A1B0GTH6 734 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 A0A1W2PQC6 194 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 GOLGA6L19H0YKK7 550 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 SYNCRIPO60506 623 aaKnown RBP15.72■□□□□ 0.11
LIMS3-201ENST00000437679 LUC7L3O95232 432 aaKnown RBP15.72■□□□□ 0.11
LIMS3-201ENST00000437679 F9P00740 461 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 ATP5BP06576 529 aaKnown RBP15.72■□□□□ 0.11
LIMS3-201ENST00000437679 GABRG2P18507 467 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 POLR2EP19388 210 aaKnown RBP15.72■□□□□ 0.11
LIMS3-201ENST00000437679 MMP8P22894 467 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 IL12RB1P42701 662 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 NSFP46459 744 aaKnown RBP15.72■□□□□ 0.11
LIMS3-201ENST00000437679 ZSCAN23Q3MJ62 389 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 SLC25A52Q3SY17 297 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 MBLAC2Q68D91 279 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 KIAA1211LQ6NV74 962 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 SERPINA13PQ6UXR4 307 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 MMS22LQ6ZRQ5 1243 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 KIAA0907Q7Z7F0 614 aaPredicted RBP15.72■□□□□ 0.11
LIMS3-201ENST00000437679 LUZP1Q86V48 1076 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 SLC30A5Q8TAD4 765 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 WFDC5Q8TCV5 224 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 SORCS1Q8WY21 1168 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 ERLEC1Q96DZ1 483 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 MYEOVQ96EZ4 313 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 C11orf70Q9BRQ4 267 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 DUSP15Q9H1R2 295 aaPredicted RBP15.72■□□□□ 0.11
LIMS3-201ENST00000437679 MYO6Q9UM54 1294 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 FRYLO94915 3013 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 SPTBN4Q9H254 2564 aa15.72■□□□□ 0.11
LIMS3-201ENST00000437679 THADAQ6YHU6 1953 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 H0Y626 953 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 MAP3K13O43283 966 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 EPN2O95208 641 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 UNGP13051 313 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-201ENST00000437679 CD70P32970 193 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 P2RY2P41231 377 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 DEUP1Q05D60 604 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 LMAN2Q12907 356 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 ENPP2Q13822 863 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 CLEC16AQ2KHT3 1053 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 FNDC3BQ53EP0 1204 aaKnown RBP15.71■□□□□ 0.11
LIMS3-201ENST00000437679 BRMS1LQ5PSV4 323 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 RABGAP1LQ5R372 815 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 TTC39BQ5VTQ0 682 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-201ENST00000437679 ARCQ7LC44 396 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 ADIPOR2Q86V24 386 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 CYB5D2Q8WUJ1 264 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 RLN3Q8WXF3 142 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 NT5C3BQ969T7 300 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 PGAP3Q96FM1 320 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-201ENST00000437679 NAP1L5Q96NT1 182 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-201ENST00000437679 PCDHB18PQ96TA0 734 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 TBCBQ99426 244 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 PRMT1Q99873 361 aaKnown RBP15.71■□□□□ 0.11
LIMS3-201ENST00000437679 AGPAT1Q99943 283 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 WDCPQ9H6R7 721 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 METTL5Q9NRN9 209 aaKnown RBP15.71■□□□□ 0.11
LIMS3-201ENST00000437679 PIGVQ9NUD9 493 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 CALCOCO1Q9P1Z2 691 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 KIAA1522Q9P206 1035 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-201ENST00000437679 TMEM59LQ9UK28 342 aa15.71■□□□□ 0.11
LIMS3-201ENST00000437679 ZNF217O75362 1048 aa15.7■□□□□ 0.1
LIMS3-201ENST00000437679 PAGE1O75459 146 aa15.7■□□□□ 0.1
LIMS3-201ENST00000437679 MOCS3O95396 460 aa15.7■□□□□ 0.1
LIMS3-201ENST00000437679 CALB1P05937 261 aa15.7■□□□□ 0.1
LIMS3-201ENST00000437679 DLDP09622 509 aaKnown RBP15.7■□□□□ 0.1
LIMS3-201ENST00000437679 NDUFV2P19404 249 aa15.7■□□□□ 0.1
LIMS3-201ENST00000437679 TFE3P19532 575 aaPredicted RBP15.7■□□□□ 0.1
LIMS3-201ENST00000437679 FLT3P36888 993 aa15.7■□□□□ 0.1
LIMS3-201ENST00000437679 CXCR3P49682 368 aa15.7■□□□□ 0.1
LIMS3-201ENST00000437679 FANCCQ00597 558 aa15.7■□□□□ 0.1
LIMS3-201ENST00000437679 CENPCQ03188 943 aa15.7■□□□□ 0.1
LIMS3-201ENST00000437679 AUHQ13825 339 aaKnown RBP15.7■□□□□ 0.1
LIMS3-201ENST00000437679 NR1I3Q14994 352 aa15.7■□□□□ 0.1
LIMS3-201ENST00000437679 MAP7D1Q3KQU3 841 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms