RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 RWDD4Q6NW29 188 aaKnown RBP21.76■■□□□ 1.07
PTPRF-207ENST00000436724 CENPUQ71F23 418 aa21.76■■□□□ 1.07
PTPRF-207ENST00000436724 BZW1Q7L1Q6 419 aaKnown RBP21.76■■□□□ 1.07
PTPRF-207ENST00000436724 SERPINB11Q96P15 392 aa21.76■■□□□ 1.07
PTPRF-207ENST00000436724 OXCT2Q9BYC2 517 aaPredicted RBP21.76■■□□□ 1.07
PTPRF-207ENST00000436724 ETNK1Q9HBU6 452 aa21.76■■□□□ 1.07
PTPRF-207ENST00000436724 NOVA2Q9UNW9 492 aaKnown RBP21.76■■□□□ 1.07
PTPRF-207ENST00000436724 NEU3Q9UQ49 428 aa21.76■■□□□ 1.07
PTPRF-207ENST00000436724 BACE2Q9Y5Z0 518 aa21.76■■□□□ 1.07
PTPRF-207ENST00000436724 MYO18AQ92614 2054 aaKnown RBP21.76■■□□□ 1.07
PTPRF-207ENST00000436724 PTPRSQ13332 1948 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 SEC24AO95486 1093 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 DNAJB2P25686 324 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 PRKD1Q15139 912 aaPredicted RBP21.75■■□□□ 1.07
PTPRF-207ENST00000436724 MIB1Q86YT6 1006 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 COLGALT1Q8NBJ5 622 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 C2orf15Q8WU43 125 aaKnown RBP21.75■■□□□ 1.07
PTPRF-207ENST00000436724 P2RY11Q96G91 374 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 FCRL2Q96LA5 508 aaPredicted RBP21.75■■□□□ 1.07
PTPRF-207ENST00000436724 YME1L1Q96TA2 773 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 WDR83Q9BRX9 315 aaKnown RBP21.75■■□□□ 1.07
PTPRF-207ENST00000436724 OSBPL2Q9H1P3 480 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 RASSF4Q9H2L5 321 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 PRDM16Q9HAZ2 1276 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 NDC80O14777 642 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 GCATO75600 419 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 APRTP07741 180 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 RPL10AP62906 217 aaKnown RBP21.75■■□□□ 1.07
PTPRF-207ENST00000436724 PDK1Q15118 436 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 MSANTD2Q6P1R3 559 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 ARHGAP18Q8N392 663 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 DEPDC1BQ8WUY9 529 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.75■■□□□ 1.07
PTPRF-207ENST00000436724 SEPT10Q9P0V9 454 aa21.75■■□□□ 1.07
PTPRF-207ENST00000436724 SLC38A8A6NNN8 435 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 ZBBXA8MT70 800 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 KCNU1A8MYU2 1149 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 HACD1B0YJ81 288 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 ALOX15BO15296 676 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 AVILO75366 819 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 HPDP32754 393 aaPredicted RBP21.74■■□□□ 1.07
PTPRF-207ENST00000436724 ARL4CP56559 192 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 PPP2R5DQ14738 602 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 ARTNQ5T4W7 220 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 CELF6Q96J87 481 aaKnown RBP21.74■■□□□ 1.07
PTPRF-207ENST00000436724 HAPLN3Q96S86 360 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 TLR8Q9NR97 1041 aaKnown RBP21.74■■□□□ 1.07
PTPRF-207ENST00000436724 TLR6Q9Y2C9 796 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 C5orf60A6NFR6 353 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 KCNK1O00180 336 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 EBAG9O00559 213 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 RASGRF2O14827 1237 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 EN2P19622 333 aaPredicted RBP21.74■■□□□ 1.07
PTPRF-207ENST00000436724 LSP1P33241 339 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 GLUD2P49448 558 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 ANKRD20A2Q5SQ80 823 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 ANKRD20A1Q5TYW2 823 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 ANKRD20A3Q5VUR7 823 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 CMTR2Q8IYT2 770 aaKnown RBP21.74■■□□□ 1.07
PTPRF-207ENST00000436724 KLC2Q9H0B6 622 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 CCSER2Q9H7U1 834 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 HS3ST4Q9Y661 456 aa21.74■■□□□ 1.07
PTPRF-207ENST00000436724 RNF103O00237 685 aa21.73■■□□□ 1.07
PTPRF-207ENST00000436724 CHADO15335 359 aa21.73■■□□□ 1.07
PTPRF-207ENST00000436724 MDH1P40925 334 aaKnown RBP21.73■■□□□ 1.07
PTPRF-207ENST00000436724 DSG1Q02413 1049 aa21.73■■□□□ 1.07
PTPRF-207ENST00000436724 BBS9Q3SYG4 887 aa21.73■■□□□ 1.07
PTPRF-207ENST00000436724 C10orf120Q5SQS8 335 aa21.73■■□□□ 1.07
PTPRF-207ENST00000436724 ARHGEF18Q6ZSZ5 1173 aa21.73■■□□□ 1.07
PTPRF-207ENST00000436724 C14orf80Q86SX3 495 aa21.73■■□□□ 1.07
PTPRF-207ENST00000436724 SLC39A13Q96H72 371 aa21.73■■□□□ 1.07
PTPRF-207ENST00000436724 CLIC5Q9NZA1 410 aa21.73■■□□□ 1.07
PTPRF-207ENST00000436724 SPG21Q9NZD8 308 aa21.73■■□□□ 1.07
PTPRF-207ENST00000436724 PPP1R12AO14974 1030 aaPredicted RBP21.72■■□□□ 1.07
PTPRF-207ENST00000436724 LAG3P18627 525 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 TBX4P57082 545 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 MAGOHP61326 146 aaKnown RBP21.72■■□□□ 1.07
PTPRF-207ENST00000436724 CEP128Q6ZU80 1094 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 VPS52Q8N1B4 723 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 ZNF461Q8TAF7 563 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 TMEM109Q9BVC6 243 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 IL23AQ9NPF7 189 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 CTNNAL1Q9UBT7 734 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 A0A0A0MRY4 1105 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 EFCAB14O75071 495 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 HMBSP08397 361 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 MAGEA9P43362 315 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 IFI35P80217 286 aaPredicted RBP21.72■■□□□ 1.07
PTPRF-207ENST00000436724 WASHC5Q12768 1159 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 AGBL2Q5U5Z8 902 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 PIK3R6Q5UE93 754 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 PDIK1LQ8N165 341 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 SPATA13Q96N96 652 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 VPS37BQ9H9H4 285 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 NDFIP2Q9NV92 336 aa21.72■■□□□ 1.07
PTPRF-207ENST00000436724 AFF4Q9UHB7 1163 aaKnown RBP21.72■■□□□ 1.07
PTPRF-207ENST00000436724 E7ESA3 106 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 ABLIM3O94929 683 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 AUHQ13825 339 aaKnown RBP21.71■■□□□ 1.07
PTPRF-207ENST00000436724 MANEALQ5VSG8 457 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms