RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ITIH5Q86UX2 942 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 TMC8Q8IU68 726 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 CREG2Q8IUH2 290 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 KATNAL2Q8IYT4 538 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 ZNF276Q8N554 614 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 CCDC185Q8N715 623 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 UBL4BQ8N7F7 174 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 PDZD8Q8NEN9 1154 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 CMASQ8NFW8 434 aaPredicted RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 HDAC7Q8WUI4 952 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 OVCA2Q8WZ82 227 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 RAPGEF5Q92565 580 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 CASP10Q92851 521 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 ZNF707Q96C28 371 aaPredicted RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 ACSF2Q96CM8 615 aaPredicted RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 MRPL38Q96DV4 380 aaKnown RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 MS4A14Q96JA4 679 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 ZNF512Q96ME7 567 aaPredicted RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 SLITRK1Q96PX8 696 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 MAGEB5Q9BZ81 275 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 SMOC2Q9H3U7 446 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 ZWILCHQ9H900 591 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 WDR6Q9NNW5 1121 aaKnown RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 TLR8Q9NR97 1041 aaKnown RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 KLHL11Q9NVR0 708 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 RRN3Q9NYV6 651 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 SFMBT1Q9UHJ3 866 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 CDC23Q9UJX2 597 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 PPM1HQ9ULR3 514 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 USP18Q9UMW8 372 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 KIAA1671Q9BY89 1806 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 COL4A4P53420 1690 aaPredicted RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 SYNJ2BP-COX16A0A087WUM0 186 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 C3orf70A6NLC5 250 aaPredicted RBP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 PDE2AO00408 941 aaPredicted RBP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 CES2O00748 559 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 MDM4O15151 490 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 MSI1O43347 362 aaKnown RBP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 PRPSAP2O60256 369 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 ZRANB2O95218 330 aaKnown RBP eCLIP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 PAPLNO95428 1278 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 F9P00740 461 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 KRT7P08729 469 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 HNRNPA1P09651 372 aaKnown RBP eCLIP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 RALAP11233 206 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 HOXA9P31269 272 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 ADRA1BP35368 520 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 GJC1P36383 396 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 PPP3CCP48454 512 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 ARSEP51690 589 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 EPHA5P54756 1037 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 RWDD2BP57060 319 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 HYAL1Q12794 435 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 EFEMP1Q12805 493 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 PWP1Q13610 501 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 GRIN2CQ14957 1233 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 CA9Q16790 459 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 HADHQ16836 314 aaKnown RBP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 SMTNL2Q2TAL5 461 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 BOLA3Q53S33 107 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 SCYL2Q6P3W7 929 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 GAREM2Q75VX8 874 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 RSRC2Q7L4I2 434 aaKnown RBP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 FAM131BQ86XD5 332 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 RCOR2Q8IZ40 523 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 RASGEF1CQ8N431 466 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 C12orf76Q8N812 135 aaPredicted RBP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 RNF139Q8WU17 664 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 TEKT4Q8WW24 435 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 PBKQ96KB5 322 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 NCAPGQ9BPX3 1015 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 CORO1BQ9BR76 489 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 RSRP1Q9BUV0 290 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 SNRNP25Q9BV90 132 aaKnown RBP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 RNF38Q9H0F5 515 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 CARD9Q9H257 536 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 TTYH1Q9H313 450 aaPredicted RBP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 RUBCNLQ9H714 662 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 FAM204AQ9H8W3 233 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 L2HGDHQ9H9P8 463 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 GPAMQ9HCL2 828 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 GPATCH2LQ9NWQ4 482 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 HCFC1R1Q9NWW0 138 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 DDIT4Q9NX09 232 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 ZDHHC7Q9NXF8 308 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 SMARCAL1Q9NZC9 954 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 TRPM5Q9NZQ8 1165 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 COX16Q9P0S2 106 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 DNMT3BQ9UBC3 853 aaKnown RBP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 UXTQ9UBK9 157 aaPredicted RBP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 MRFAP1Q9Y605 127 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 NLRC5Q86WI3 1866 aa7.3□□□□□ -1.24
LSM3P3-201ENST00000436601 CCDC195A0A1B0GUA6 201 aa7.29□□□□□ -1.24
LSM3P3-201ENST00000436601 C2orf78A6NCI8 922 aa7.29□□□□□ -1.24
LSM3P3-201ENST00000436601 KCNU1A8MYU2 1149 aa7.29□□□□□ -1.24
LSM3P3-201ENST00000436601 PI4K2BG5E9Z4 385 aa7.29□□□□□ -1.24
LSM3P3-201ENST00000436601 SOX1O00570 391 aaPredicted RBP7.29□□□□□ -1.24
LSM3P3-201ENST00000436601 LINC01565O15544 149 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms