RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 RXFP3Q9NSD7 469 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 LIMA1Q9UHB6 759 aaKnown RBP18.98■□□□□ 0.63
HMGN1-207ENST00000436324 SLC12A6Q9UHW9 1150 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 ABCA7Q8IZY2 2146 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 DCDC2BA2VCK2 349 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 DAB1O75553 588 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 EPHX1P07099 455 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 SDHBP21912 280 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 PTGER3P43115 390 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 RPL6Q02878 288 aaKnown RBP18.97■□□□□ 0.63
HMGN1-207ENST00000436324 NME3Q13232 169 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 NCAPHQ15003 741 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 C2CD6Q53TS8 623 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 MPP7Q5T2T1 576 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 CAVIN1Q6NZI2 390 aaKnown RBP18.97■□□□□ 0.63
HMGN1-207ENST00000436324 ADIPOR2Q86V24 386 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 ERICH1Q86X53 443 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 CACUL1Q86Y37 369 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 AHI1Q8N157 1196 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 ZNF366Q8N895 744 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.97■□□□□ 0.63
HMGN1-207ENST00000436324 ATP6V0D2Q8N8Y2 350 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 NETO1Q8TDF5 533 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 SLC20A1Q8WUM9 679 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 CPA5Q8WXQ8 436 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 BTN2A3PQ96KV6 586 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.97■□□□□ 0.63
HMGN1-207ENST00000436324 PLA2G4CQ9UP65 541 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 SIK3Q9Y2K2 1263 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 SPAG17Q6Q759 2223 aa18.97■□□□□ 0.63
HMGN1-207ENST00000436324 IGHV1OR15-9A0A0B4J2B8 117 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 FOXD2O60548 495 aaPredicted RBP18.96■□□□□ 0.63
HMGN1-207ENST00000436324 POLR2EP19388 210 aaKnown RBP18.96■□□□□ 0.63
HMGN1-207ENST00000436324 ABCB4P21439 1286 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 UBXN1Q04323 297 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 LMAN2Q12907 356 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 CDH18Q13634 790 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 ENPP2Q13822 863 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 E2F5Q15329 346 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 ANO6Q4KMQ2 910 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 NAA35Q5VZE5 725 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 MMS22LQ6ZRQ5 1243 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 SLC26A9Q7LBE3 791 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 KIAA0907Q7Z7F0 614 aaPredicted RBP18.96■□□□□ 0.63
HMGN1-207ENST00000436324 CCDC117Q8IWD4 279 aaPredicted RBP18.96■□□□□ 0.63
HMGN1-207ENST00000436324 FIBINQ8TAL6 211 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 EPS8L1Q8TE68 723 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 C18orf8Q96DM3 657 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 SPAG5Q96R06 1193 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 IRX2Q9BZI1 471 aaPredicted RBP18.96■□□□□ 0.63
HMGN1-207ENST00000436324 MKRN2Q9H000 416 aaKnown RBP18.96■□□□□ 0.63
HMGN1-207ENST00000436324 PRDM16Q9HAZ2 1276 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 SPTBN4Q9H254 2564 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 RALGAPA1Q6GYQ0 2036 aa18.96■□□□□ 0.63
HMGN1-207ENST00000436324 ATXN2Q99700 1313 aaKnown RBP18.96■□□□□ 0.63
HMGN1-207ENST00000436324 LGALS16A8MUM7 142 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 KCNU1A8MYU2 1149 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 PATE3B3GLJ2 98 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 GOLGA8SH3BPF8 625 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 M0QYT0 321 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 ZNF217O75362 1048 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 ATP5BP06576 529 aaKnown RBP18.95■□□□□ 0.62
HMGN1-207ENST00000436324 ATP1A3P13637 1013 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 CCR1P32246 355 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 CDH5P33151 784 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-207ENST00000436324 NOS2P35228 1153 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 SOX5P35711 763 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 EIF4EBP2Q13542 120 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-207ENST00000436324 FSCBQ5H9T9 825 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 FAM102AQ5T9C2 384 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-207ENST00000436324 RNF43Q68DV7 783 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 SLC36A4Q6YBV0 504 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 ERMP1Q7Z2K6 904 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 CIR1Q86X95 450 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-207ENST00000436324 TMPRSS6Q8IU80 811 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 ZNF397Q8NF99 534 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-207ENST00000436324 NEK11Q8NG66 645 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 RTKNQ9BST9 563 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 HSD3B7Q9H2F3 369 aa18.95■□□□□ 0.62
HMGN1-207ENST00000436324 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.95■□□□□ 0.62
HMGN1-207ENST00000436324 THADAQ6YHU6 1953 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 F5H5T6 163 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 H0Y626 953 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 SLC30A4O14863 429 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 AP5Z1O43299 807 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 LUC7L3O95232 432 aaKnown RBP18.94■□□□□ 0.62
HMGN1-207ENST00000436324 DLDP09622 509 aaKnown RBP18.94■□□□□ 0.62
HMGN1-207ENST00000436324 SLC2A3P11169 496 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 ZNF18P17022 549 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 TFE3P19532 575 aaPredicted RBP18.94■□□□□ 0.62
HMGN1-207ENST00000436324 NUMBP49757 651 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 SULT1E1P49888 294 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 JAM2P57087 298 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 PTPRNQ16849 979 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 LYSMD4Q5XG99 296 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 PHLDB2Q86SQ0 1253 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 XYLT1Q86Y38 959 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 ZDHHC17Q8IUH5 632 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 ZNF557Q8N988 423 aaPredicted RBP18.94■□□□□ 0.62
HMGN1-207ENST00000436324 SIPA1Q96FS4 1042 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms