RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 MSANTD2Q6P1R3 559 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 TMEM270Q6UE05 265 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 KIAA1324Q6UXG2 1013 aaKnown RBP9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 SIX6OS1Q8N1H7 587 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 TRIML1Q8N9V2 468 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 DEFB124Q8NES8 71 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 LMO3Q8TAP4 145 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 UBA3Q8TBC4 463 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 DDI1Q8WTU0 396 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 SLC35F5Q8WV83 523 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 UCMAQ8WVF2 138 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 EDEM1Q92611 657 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 ZSWIM1Q9BR11 485 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 PRDM16Q9HAZ2 1276 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 ITM2CQ9NQX7 267 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 ABCC13Q9NSE7 274 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 MAN1B1Q9UKM7 699 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 NFE2L3Q9Y4A8 694 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 WASF2Q9Y6W5 498 aa9.82□□□□□ -0.84
CDC42-IT1-201ENST00000431803 PCNX2A6NKB5 2137 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 KCNJ18B7U540 433 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 RNF225M0QZC1 329 aaPredicted RBP9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 P4HA2O15460 535 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 MSI1O43347 362 aaKnown RBP9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 TIMM44O43615 452 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 GJB3O75712 270 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 NCAM1P13591 858 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 PRKCHP24723 683 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 HLA-FP30511 346 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 PPP1R2P41236 205 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 TPMTP51580 245 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 COPAP53621 1224 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 GCNT1Q02742 428 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 BECN1Q14457 450 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 ADGRF1Q5T601 910 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 PMF1Q6P1K2 205 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 KIAA0907Q7Z7F0 614 aaPredicted RBP9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 PPM1KQ8N3J5 372 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 MINDY1Q8N5J2 469 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 CADM4Q8NFZ8 388 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 RNF139Q8WU17 664 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 SORCS1Q8WY21 1168 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 DNASE2BQ8WZ79 361 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 IRGQQ8WZA9 623 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 KAT5Q92993 513 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 TOE1Q96GM8 510 aaKnown RBP9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 NT5C1BQ96P26 610 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 GTPBP2Q9BX10 602 aaKnown RBP9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 CIPCQ9C0C6 399 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 DNAAF2Q9NVR5 837 aaKnown RBP9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 WSB2Q9NYS7 404 aaPredicted RBP9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 SUSD2Q9UGT4 822 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 SFMBT1Q9UHJ3 866 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 NBEAQ8NFP9 2946 aa9.81□□□□□ -0.84
CDC42-IT1-201ENST00000431803 ADAMTS9Q9P2N4 1935 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 ITPR1Q14643 2758 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 M0QYV0 167 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 SYNCRIPO60506 623 aaKnown RBP9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 NDUFS2O75306 463 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 PROS1P07225 676 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 LCP1P13796 627 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 BRD2P25440 801 aaKnown RBP9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 RPL34P49207 117 aaKnown RBP9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 SGSHP51688 502 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 ATXN3P54252 364 aaPredicted RBP9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 MARSP56192 900 aaKnown RBP9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 RING1Q06587 406 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 CAMK2GQ13555 558 aaPredicted RBP9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 MORC3Q14149 939 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 AGERQ15109 404 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 STILQ15468 1287 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 CNGA2Q16280 664 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 CCDC40Q4G0X9 1142 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 FAM133BQ5BKY9 247 aaKnown RBP9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 WDR45BQ5MNZ6 344 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 MPP7Q5T2T1 576 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 SYCP2LQ5T4T6 812 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 ISM2Q6H9L7 571 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 SERPINA13PQ6UXR4 307 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 ADIPOR2Q86V24 386 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 TMPRSS6Q8IU80 811 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 TRIM59Q8IWR1 403 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 HDDC3Q8N4P3 179 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 OR2I1PQ8NGU4 316 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 WFIKKN2Q8TEU8 576 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 SIPA1Q96FS4 1042 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 TMEM245Q9H330 911 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 SLC32A1Q9H598 525 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 CNTN6Q9UQ52 1028 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 PCDHB4Q9Y5E5 795 aa9.8□□□□□ -0.84
CDC42-IT1-201ENST00000431803 PKD1L2Q7Z442 2459 aa9.79□□□□□ -0.84
CDC42-IT1-201ENST00000431803 LAMA5O15230 3695 aa9.79□□□□□ -0.84
CDC42-IT1-201ENST00000431803 BICDL2A1A5D9 508 aa9.79□□□□□ -0.84
CDC42-IT1-201ENST00000431803 C1QTNF9BB2RNN3 333 aa9.79□□□□□ -0.84
CDC42-IT1-201ENST00000431803 TSPAN3O60637 253 aa9.79□□□□□ -0.84
CDC42-IT1-201ENST00000431803 OPHN1O60890 802 aa9.79□□□□□ -0.84
CDC42-IT1-201ENST00000431803 FBXO21O94952 628 aa9.79□□□□□ -0.84
CDC42-IT1-201ENST00000431803 TOP3BO95985 862 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms