RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 C10orf25Q5T742 122 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 L1TD1Q5T7N2 865 aaKnown RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 FAM90A2PQ658T7 463 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 RAP1GAP2Q684P5 730 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 RINT1Q6NUQ1 792 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 WDR93Q6P2C0 686 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 TMEM65Q6PI78 240 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 SERPINA13PQ6UXR4 307 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 ZNF813Q6ZN06 617 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 C9orf47Q6ZRZ4 202 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 KCTD20Q7Z5Y7 419 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 ZNF354CQ86Y25 554 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 UEVLDQ8IX04 471 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 NKAPQ8N5F7 415 aaKnown RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 LINC01465Q8N7H1 131 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 ANKRD42Q8N9B4 389 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 OR6Y1Q8NGX8 325 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 BCAS4Q8TDM0 211 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 RUBCNQ92622 972 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 SH3KBP1Q96B97 665 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 CTHRC1Q96CG8 243 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 PRR25Q96S07 402 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 ARPC5LQ9BPX5 153 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 MACROD1Q9BQ69 325 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 SENP7Q9BQF6 1050 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 TRIM2Q9C040 744 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 CIPCQ9C0C6 399 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 OBP2BQ9NPH6 170 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 LRFN1Q9P244 771 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 KIF17Q9P2E2 1029 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 CDC23Q9UJX2 597 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 SCAF8Q9UPN6 1271 aaKnown RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 TMEM247A6NEH6 219 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 LGALS16A8MUM7 142 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 J3KTA2 159 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 ACKR2O00590 384 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 PIP5K1BO14986 540 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 NPHP1O15259 732 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 CTIFO43310 598 aaKnown RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 SPRY2O43597 315 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 ASNA1O43681 348 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 KIF1CO43896 1103 aaKnown RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 CCNT1O60563 726 aaKnown RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 TSPAN3O60637 253 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 CBFA2T3O75081 653 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 ALDOAP04075 364 aaKnown RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 CD63P08962 238 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 CYP2A6P11509 494 aaPredicted RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 PRF1P14222 555 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 DRD1P21728 446 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 PDIA3P30101 505 aaKnown RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 SLC8A1P32418 973 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 HTR7P34969 479 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 CHKAP35790 457 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 ARL1P40616 181 aaPredicted RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 AARSP49588 968 aaKnown RBP eCLIP2.43□□□□□ -2.02
CDC40-204ENST00000431461 DIO1P49895 249 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 OAZ1P54368 228 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 SLC12A2P55011 1212 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 RBM6P78332 1123 aaKnown RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 GOLGA8FQ08AF8 430 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 LMAN2Q12907 356 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 MTAPQ13126 283 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 BFSP2Q13515 415 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 TRIM14Q14142 442 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 KCNB1Q14721 858 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 LARS2Q15031 903 aaKnown RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 CNGA3Q16281 694 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 PFKFB3Q16875 520 aaPredicted RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 FAM187BQ17R55 369 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 INO80DQ53TQ3 878 aaPredicted RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 DGAT2L7PQ6IED9 249 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 ACSM6Q6P461 480 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 KIRREL2Q6UWL6 708 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 SLC44A2Q8IWA5 706 aaPredicted RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 FAM47BQ8NA70 645 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 ATG16L2Q8NAA4 619 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 SPPL3Q8TCT6 385 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 OTUD7AQ8TE49 926 aaPredicted RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 IPO4Q8TEX9 1081 aaKnown RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 REXO5Q96IC2 774 aaKnown RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 ZBTB45Q96K62 511 aaPredicted RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 PIGSQ96S52 555 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 NPAS1Q99742 590 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 DDX23Q9BUQ8 820 aaKnown RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 MAGEH1Q9H213 219 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 HIPK2Q9H2X6 1198 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 FOXP1Q9H334 677 aaPredicted RBP2.43□□□□□ -2.02
CDC40-204ENST00000431461 NOD2Q9HC29 1040 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 PRDM8Q9NQV8 689 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 PI4KBQ9UBF8 816 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 FZD4Q9ULV1 537 aa2.43□□□□□ -2.02
CDC40-204ENST00000431461 FER1L4A9Z1Z3 1794 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.42□□□□□ -2.02
CDC40-204ENST00000431461 AP4M1O00189 453 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 PCDH17O14917 1159 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 DSCR3O14972 297 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 NKX2-8O15522 239 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 DHRS4L1P0CG22 281 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 TACR3P29371 465 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms