RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TTLL4Q14679 1199 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 KPNB1Q14974 876 aaKnown RBP8.97□□□□□ -0.97
GABPB1-205ENST00000429662 TRIM60Q495X7 471 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 CCDC14Q49A88 953 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 KHDC1Q4VXA5 237 aaKnown RBP8.97□□□□□ -0.97
GABPB1-205ENST00000429662 SNX30Q5VWJ9 437 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 STEAP4Q687X5 459 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 ARHGAP17Q68EM7 881 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 AAGABQ6PD74 315 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 C1orf228Q6PIY5 440 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 NPNTQ6UXI9 565 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 SLC39A5Q6ZMH5 540 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 FAM183BPQ6ZVS7 135 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 CYP4V2Q6ZWL3 525 aaPredicted RBP8.97□□□□□ -0.97
GABPB1-205ENST00000429662 CAND1Q86VP6 1230 aaKnown RBP8.97□□□□□ -0.97
GABPB1-205ENST00000429662 LRRC71Q8N4P6 559 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 TTC8Q8TAM2 541 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 KCNV2Q8TDN2 545 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 SPDL1Q96EA4 605 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 ACAP3Q96P50 834 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 TWNKQ96RR1 684 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 TSPAN18Q96SJ8 248 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 KLF6Q99612 283 aaPredicted RBP8.97□□□□□ -0.97
GABPB1-205ENST00000429662 PRDM12Q9H4Q4 367 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 C10orf88Q9H8K7 445 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 BTBD7Q9P203 1132 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 HESX1Q9UBX0 185 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 TJP2Q9UDY2 1190 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 DCDC2Q9UHG0 476 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 TSPAN16Q9UKR8 245 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 DNAH14Q0VDD8 3507 aa8.97□□□□□ -0.97
GABPB1-205ENST00000429662 COL11A1P12107 1806 aaPredicted RBP8.96□□□□□ -0.98
GABPB1-205ENST00000429662 ASB14A6NK59 587 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 B2RBV5 119 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 E5RJQ4 531 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 GLRA3O75311 464 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 ENTPD5O75356 428 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 TM7SF2O76062 418 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 IL4RP24394 825 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 GRK2P25098 689 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 GARSP41250 739 aaKnown RBP8.96□□□□□ -0.98
GABPB1-205ENST00000429662 NDST1P52848 882 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 OSTNP61366 133 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 AP2B1P63010 937 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 IRX4P78413 519 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 CDC42EP1Q00587 391 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 BST1Q10588 318 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 GRIK3Q13003 919 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 LAMC2Q13753 1193 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 KCTD2Q14681 263 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 RCN1Q15293 331 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 PCBP1Q15365 356 aaKnown RBP eCLIP8.96□□□□□ -0.98
GABPB1-205ENST00000429662 TAF5Q15542 800 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 CHI3L2Q15782 390 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 DPYSL2Q16555 572 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 LY6KQ17RY6 165 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 Q3C1V9 767 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 DCAF4L1Q3SXM0 396 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 PKDCCQ504Y2 493 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 C1orf53Q5VUE5 145 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 SCARA3Q6AZY7 606 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 ANO7Q6IWH7 933 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 SCYL2Q6P3W7 929 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 OLFML1Q6UWY5 402 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 UNC5AQ6ZN44 842 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 LRRC74BQ6ZQY2 392 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 RINLQ6ZS11 566 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 MARK2Q7KZI7 788 aaKnown RBP8.96□□□□□ -0.98
GABPB1-205ENST00000429662 ADGRG6Q86SQ4 1221 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 SCUBE1Q8IWY4 988 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 PQLC3Q8N755 202 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 PCDH19Q8TAB3 1148 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 PPP1R14CQ8TAE6 165 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 UBA3Q8TBC4 463 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 FAM172AQ8WUF8 416 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 SOCS4Q8WXH5 440 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 SIGLEC10Q96LC7 697 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 QKIQ96PU8 341 aaKnown RBP eCLIP8.96□□□□□ -0.983e-6■■■■□ 21.4
GABPB1-205ENST00000429662 NR1H4Q96RI1 486 aaPredicted RBP8.96□□□□□ -0.98
GABPB1-205ENST00000429662 PBX4Q9BYU1 374 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 VCX3BQ9H321 246 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 PDZD7Q9H5P4 517 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 NRDE2Q9H7Z3 1164 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 CD320Q9NPF0 282 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 DPP3Q9NY33 737 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 MOCS1Q9NZB8 636 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 RBPJLQ9UBG7 517 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 SCOCQ9UIL1 159 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 ATP11BQ9Y2G3 1177 aa8.96□□□□□ -0.98
GABPB1-205ENST00000429662 DOCK5Q9H7D0 1870 aa8.95□□□□□ -0.98
GABPB1-205ENST00000429662 WDR87Q6ZQQ6 2873 aa8.95□□□□□ -0.98
GABPB1-205ENST00000429662 KMT2BQ9UMN6 2715 aaPredicted RBP8.95□□□□□ -0.98
GABPB1-205ENST00000429662 SF3B1O75533 1304 aaKnown RBP eCLIP8.95□□□□□ -0.98
GABPB1-205ENST00000429662 FAM237BA0A1B0GVD1 139 aa8.95□□□□□ -0.98
GABPB1-205ENST00000429662 MAGEA13PA6NCF6 341 aa8.95□□□□□ -0.98
GABPB1-205ENST00000429662 FAM86C2PA6NEL3 165 aa8.95□□□□□ -0.98
GABPB1-205ENST00000429662 SDR42E2A6NKP2 422 aa8.95□□□□□ -0.98
GABPB1-205ENST00000429662 GRXCR1A8MXD5 290 aa8.95□□□□□ -0.98
GABPB1-205ENST00000429662 H0Y3Z8 333 aa8.95□□□□□ -0.98
GABPB1-205ENST00000429662 CAPN9O14815 690 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms