RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 RPAINQ86UA6 219 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 METTL23Q86XA0 190 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 ACMSDQ8TDX5 336 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 IRGQQ8WZA9 623 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 TUBB6Q9BUF5 446 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 PRDM12Q9H4Q4 367 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 SAR1AQ9NR31 198 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 SEPT10Q9P0V9 454 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 FBXW11Q9UKB1 542 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 MTO1Q9Y2Z2 717 aaKnown RBP14.08□□□□□ -0.15
THBS3-202ENST00000428962 WDR27A2RRH5 827 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 MYADML2A6NDP7 307 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 NRP1O14786 923 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 MX2P20592 715 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 BGNP21810 368 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 SERPINB6P35237 376 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 BMPR2Q13873 1038 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 GDF6Q6KF10 455 aaPredicted RBP14.08□□□□□ -0.16
THBS3-202ENST00000428962 MRPL10Q7Z7H8 261 aaKnown RBP14.08□□□□□ -0.16
THBS3-202ENST00000428962 SERINC5Q86VE9 423 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 KIF2BQ8N4N8 673 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 PDCD7Q8N8D1 485 aaKnown RBP14.08□□□□□ -0.16
THBS3-202ENST00000428962 PTPRN2Q92932 1015 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 TMEM237Q96Q45 408 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 UPF3AQ9H1J1 476 aaKnown RBP14.08□□□□□ -0.16
THBS3-202ENST00000428962 C12orf65Q9H3J6 166 aaKnown RBP14.08□□□□□ -0.16
THBS3-202ENST00000428962 CD248Q9HCU0 757 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 KLHL8Q9P2G9 620 aaPredicted RBP14.08□□□□□ -0.16
THBS3-202ENST00000428962 SCN10AQ9Y5Y9 1956 aa14.08□□□□□ -0.16
THBS3-202ENST00000428962 MYBPHLA2RUH7 354 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 YJEFN3A6XGL0 299 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 MEIS3P2A8K0S8 358 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 E7ENQ6 273 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 KRT16P08779 473 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 CTSHP09668 335 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 CYBAP13498 195 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 EZRP15311 586 aaKnown RBP14.07□□□□□ -0.16
THBS3-202ENST00000428962 ERCC2P18074 760 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 PSMB4P28070 264 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 CRHR1P34998 444 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 GRIA1P42261 906 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 SCNN1GP51170 649 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 ARFIP2P53365 341 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 NIPAL4Q0D2K0 466 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 WASHC5Q12768 1159 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 SEMA3BQ13214 749 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 CXCL17Q6UXB2 119 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 ZNF567Q8N184 647 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 PGBD4Q96DM1 585 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 EPAS1Q99814 870 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 CSNK1G1Q9HCP0 422 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 WDR6Q9NNW5 1121 aaKnown RBP14.07□□□□□ -0.16
THBS3-202ENST00000428962 ALG13Q9NP73 1137 aaKnown RBP14.07□□□□□ -0.16
THBS3-202ENST00000428962 PCMTD2Q9NV79 361 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 DDIT4Q9NX09 232 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 DCTN4Q9UJW0 460 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 DSEQ9UL01 958 aa14.07□□□□□ -0.16
THBS3-202ENST00000428962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.06□□□□□ -0.16
THBS3-202ENST00000428962 ARHGEF37A1IGU5 675 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 ERI2A8K979 691 aaKnown RBP14.06□□□□□ -0.16
THBS3-202ENST00000428962 BIRC5O15392 142 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 UGT1A9O60656 530 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 WFS1O76024 890 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 CHRNA1P02708 482 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 FYNP06241 537 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 USP17L7P0C7H9 530 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 MGAT1P26572 445 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 TARSP26639 723 aaKnown RBP14.06□□□□□ -0.16
THBS3-202ENST00000428962 GTF2A1P52655 376 aaPredicted RBP14.06□□□□□ -0.16
THBS3-202ENST00000428962 SESN2P58004 480 aaPredicted RBP14.06□□□□□ -0.16
THBS3-202ENST00000428962 PPIDQ08752 370 aaKnown RBP14.06□□□□□ -0.16
THBS3-202ENST00000428962 MGAT3Q09327 533 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 OVGP1Q12889 678 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 CRYMQ14894 314 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 UPP1Q16831 310 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 TAF1BQ53T94 588 aaPredicted RBP14.06□□□□□ -0.16
THBS3-202ENST00000428962 FAM182AQ5T1J6 154 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 STXBP5Q5T5C0 1151 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 MROH9Q5TGP6 573 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 PID1Q7Z2X4 250 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 TNS4Q8IZW8 715 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 NDUFAF2Q8N183 169 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 SCML4Q8N228 414 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 TRPV1Q8NER1 839 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 ZMIZ2Q8NF64 920 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 RFWD2Q8NHY2 731 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 LPPQ93052 612 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 ATP2A3Q93084 1043 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 OXNAD1Q96HP4 312 aaPredicted RBP14.06□□□□□ -0.16
THBS3-202ENST00000428962 C7orf26Q96N11 449 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 UGT1A7Q9HAW7 530 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 UGT1A10Q9HAW8 530 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 UGT1A8Q9HAW9 530 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 TMPRSS4Q9NRS4 437 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 STK38LQ9Y2H1 464 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 A0A0G2JND7 137 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 CASTOR2A6NHX0 329 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 DNAJC6O75061 913 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 POLBP06746 335 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 GARSP41250 739 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms