RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ZFPM1Q8IX07 1006 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 UBR7Q8N806 425 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 C12orf43Q96C57 262 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 SENP7Q9BQF6 1050 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 VAT1LQ9HCJ6 419 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 XAB2Q9HCS7 855 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 APOBEC2Q9Y235 224 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 TTLL3Q9Y4R7 772 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 STYXL1Q9Y6J8 313 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 OXSR1O95747 527 aaPredicted RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 GARTP22102 1010 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 KCNA4P22459 653 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 HMOX2P30519 316 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 CYP2J2P51589 502 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 ATP6V0D1P61421 351 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 TRIM25Q14258 630 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 SPOPLQ6IQ16 392 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 MMAAQ8IVH4 418 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 KYQ8NBH2 561 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 OR13F1Q8NGS4 319 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 TGFBRAP1Q8WUH2 860 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 PKP2Q99959 881 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 ZNF518BQ9C0D4 1074 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 GPN2Q9H9Y4 310 aaPredicted RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 VTA1Q9NP79 307 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 VWA7Q9Y334 891 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 ZNF711Q9Y462 761 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 AHDC1Q5TGY3 1603 aaPredicted RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 KBTBD13C9JR72 458 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 ADCY6O43306 1168 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 KLRK1P26718 216 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 GSSP48637 474 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 SLC25A11Q02978 314 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 UBE2SQ16763 222 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 FNBP1LQ5T0N5 605 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 STEAP4Q687X5 459 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 TXNRD3NBQ6F5E7 133 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 SIAH1Q8IUQ4 282 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 TERB1Q8NA31 727 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 ZNF347Q96SE7 839 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 YME1L1Q96TA2 773 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 PCDHGB1Q9Y5G3 927 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 COL16A1Q07092 1604 aaPredicted RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 ZNF487B1APH4 448 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 FAM13AO94988 1023 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 PTPN1P18031 435 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 MYF6P23409 242 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 STAT3P40763 770 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 HNRNPFP52597 415 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 NDST2P52849 883 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 RFX8Q6ZV50 586 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 HAUS6Q7Z4H7 955 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 CENPSQ8N2Z9 138 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 PIK3C3Q8NEB9 887 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 ZNF606Q8WXB4 792 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 HEMGNQ9BXL5 484 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 ZBTB26Q9HCK0 441 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 RAD54BQ9Y620 910 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 CACNA1EQ15878 2313 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 FREM1Q5H8C1 2179 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 PSMD12O00232 456 aaPredicted RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 MARCH6O60337 910 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 RNASEH2AO75792 299 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 RAG1P15918 1043 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 TFEBP19484 476 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 PSMC1P62191 440 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 INAQ16352 499 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 CYP2A13Q16696 494 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 MEX3CQ5U5Q3 659 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 TTC39BQ5VTQ0 682 aaPredicted RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 TTBK2Q6IQ55 1244 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 XKR5Q6UX68 686 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 CHSY3Q70JA7 882 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 USP37Q86T82 979 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 MAPK15Q8TD08 544 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 CHAC2Q8WUX2 184 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 EME1Q96AY2 570 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 TMIGD2Q96BF3 282 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 WRNIP1Q96S55 665 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 ACO2Q99798 780 aaKnown RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 SH2D3AQ9BRG2 576 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 PARVBQ9HBI1 364 aa5.28□□□□□ -1.56
RIF1-203ENST00000428287 WRAP73Q9P2S5 460 aaPredicted RBP5.28□□□□□ -1.56
RIF1-203ENST00000428287 LOC102724428A0A0B4J2F2 783 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SORBS2O94875 1100 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 PARNO95453 639 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 ESRRBO95718 433 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SERPINE1P05121 402 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 MLNP12872 115 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SLC5A3P53794 718 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SIK1P57059 783 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TUBA3CQ13748 450 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 LMBRD2Q68DH5 695 aaPredicted RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 TTC30AQ86WT1 665 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 LEMD2Q8NC56 503 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ZUFSPQ96AP4 578 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 VMP1Q96GC9 406 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 PAIP1Q9H074 479 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 RPF2Q9H7B2 306 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 FBXO8Q9NRD0 319 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms