RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 FTH1P19P0C7X4 201 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 HLA-EP13747 358 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 LCP1P13796 627 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 POLR2EP19388 210 aaKnown RBP18.1■□□□□ 0.49
DDR1-235ENST00000428153 NUCB2P80303 420 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 SFSWAPQ12872 951 aaKnown RBP18.1■□□□□ 0.49
DDR1-235ENST00000428153 LRMPQ12912 555 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 ARID5BQ14865 1188 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 TTC31Q49AM3 519 aaPredicted RBP18.1■□□□□ 0.49
DDR1-235ENST00000428153 FAM133BQ5BKY9 247 aaKnown RBP18.1■□□□□ 0.49
DDR1-235ENST00000428153 PPM1KQ8N3J5 372 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 CHCHD4Q8N4Q1 142 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 FIBINQ8TAL6 211 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 LMO3Q8TAP4 145 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 SERPINB11Q96P15 392 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 TRIM62Q9BVG3 475 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 BTBD1Q9H0C5 482 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 GAREM1Q9H706 876 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 SGK2Q9HBY8 427 aa18.1■□□□□ 0.49
DDR1-235ENST00000428153 EIF2B4Q9UI10 523 aaKnown RBP18.1■□□□□ 0.49
DDR1-235ENST00000428153 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.1■□□□□ 0.49
DDR1-235ENST00000428153 M0QYV0 167 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 FLRT2O43155 660 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 GABBR2O75899 941 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 DNTTP04053 509 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 ASLP04424 464 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 GRIA4P48058 902 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 TBX4P57082 545 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 CCDC40Q4G0X9 1142 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 USP30Q70CQ3 517 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 HJURPQ8NCD3 748 aaPredicted RBP18.09■□□□□ 0.49
DDR1-235ENST00000428153 BAHD1Q8TBE0 780 aaPredicted RBP18.09■□□□□ 0.49
DDR1-235ENST00000428153 CYB5D2Q8WUJ1 264 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 TTC17Q96AE7 1141 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 LMLNQ96KR4 655 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 CAMK1GQ96NX5 476 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 PRSS16Q9NQE7 514 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 TM7SF3Q9NS93 570 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 CNTN6Q9UQ52 1028 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 TLR6Q9Y2C9 796 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 ATRXP46100 2492 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 CACNA1GO43497 2377 aa18.09■□□□□ 0.49
DDR1-235ENST00000428153 ITPR1Q14643 2758 aa18.08■□□□□ 0.49
DDR1-235ENST00000428153 NUMA1Q14980 2115 aa18.08■□□□□ 0.49
DDR1-235ENST00000428153 BICDL2A1A5D9 508 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 RNF225M0QZC1 329 aaPredicted RBP18.08■□□□□ 0.48
DDR1-235ENST00000428153 TBL1XO60907 577 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 SEMA4FO95754 770 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 GNA14O95837 355 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 ACSL1P33121 698 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 ACADSBP45954 432 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 RGS7P49802 495 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 MARSP56192 900 aaKnown RBP18.08■□□□□ 0.48
DDR1-235ENST00000428153 RPS14P62263 151 aaKnown RBP18.08■□□□□ 0.48
DDR1-235ENST00000428153 BNC1Q01954 994 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 SUZ12Q15022 739 aaKnown RBP18.08■□□□□ 0.48
DDR1-235ENST00000428153 TEAD4Q15561 434 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 HLA-BQ31612 363 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 ZNF776Q68DI1 518 aaPredicted RBP18.08■□□□□ 0.48
DDR1-235ENST00000428153 SMYD5Q6GMV2 418 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 TTI2Q6NXR4 508 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 MFN1Q8IWA4 741 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 STK32AQ8WU08 396 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 CDC6Q99741 560 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 ZSWIM1Q9BR11 485 aa18.08■□□□□ 0.48
DDR1-235ENST00000428153 NBEAQ8NFP9 2946 aa18.07■□□□□ 0.48
DDR1-235ENST00000428153 CAPNS1P04632 268 aa18.07■□□□□ 0.48
DDR1-235ENST00000428153 BRD2P25440 801 aaKnown RBP18.07■□□□□ 0.48
DDR1-235ENST00000428153 CD27P26842 260 aa18.07■□□□□ 0.48
DDR1-235ENST00000428153 CD70P32970 193 aa18.07■□□□□ 0.48
DDR1-235ENST00000428153 SGSHP51688 502 aa18.07■□□□□ 0.48
DDR1-235ENST00000428153 ST8SIA6P61647 398 aa18.07■□□□□ 0.48
DDR1-235ENST00000428153 RFWD3Q6PCD5 774 aa18.07■□□□□ 0.48
DDR1-235ENST00000428153 CACUL1Q86Y37 369 aa18.07■□□□□ 0.48
DDR1-235ENST00000428153 WFDC5Q8TCV5 224 aa18.07■□□□□ 0.48
DDR1-235ENST00000428153 MYO19Q96H55 970 aa18.07■□□□□ 0.48
DDR1-235ENST00000428153 SLC39A13Q96H72 371 aa18.07■□□□□ 0.48
DDR1-235ENST00000428153 RSPH9Q9H1X1 276 aaPredicted RBP18.07■□□□□ 0.48
DDR1-235ENST00000428153 C6orf106Q9H6K1 298 aaPredicted RBP18.07■□□□□ 0.48
DDR1-235ENST00000428153 FNDC3AQ9Y2H6 1198 aaKnown RBP18.07■□□□□ 0.48
DDR1-235ENST00000428153 DFNA5O60443 496 aa18.06■□□□□ 0.48
DDR1-235ENST00000428153 RNASEH1O60930 286 aaKnown RBP18.06■□□□□ 0.48
DDR1-235ENST00000428153 DKK1O94907 266 aa18.06■□□□□ 0.48
DDR1-235ENST00000428153 FYNP06241 537 aa18.06■□□□□ 0.48
DDR1-235ENST00000428153 CD44P16070 742 aaKnown RBP18.06■□□□□ 0.48
DDR1-235ENST00000428153 SLC6A4P31645 630 aa18.06■□□□□ 0.48
DDR1-235ENST00000428153 GPD2P43304 727 aa18.06■□□□□ 0.48
DDR1-235ENST00000428153 HNRNPA1L2Q32P51 320 aaKnown RBP18.06■□□□□ 0.48
DDR1-235ENST00000428153 NADSYN1Q6IA69 706 aa18.06■□□□□ 0.48
DDR1-235ENST00000428153 FAM124AQ86V42 546 aa18.06■□□□□ 0.48
DDR1-235ENST00000428153 PROSER1Q86XN7 944 aa18.06■□□□□ 0.48
DDR1-235ENST00000428153 CCDC117Q8IWD4 279 aaPredicted RBP18.06■□□□□ 0.48
DDR1-235ENST00000428153 TRIM59Q8IWR1 403 aa18.06■□□□□ 0.48
DDR1-235ENST00000428153 EHBP1Q8NDI1 1231 aa18.06■□□□□ 0.48
DDR1-235ENST00000428153 DQX1Q8TE96 717 aaKnown RBP18.06■□□□□ 0.48
DDR1-235ENST00000428153 SETD7Q8WTS6 366 aaKnown RBP18.06■□□□□ 0.48
DDR1-235ENST00000428153 ERCC4Q92889 916 aaPredicted RBP18.06■□□□□ 0.48
DDR1-235ENST00000428153 KAT5Q92993 513 aa18.06■□□□□ 0.48
DDR1-235ENST00000428153 FCRL2Q96LA5 508 aaPredicted RBP18.06■□□□□ 0.48
DDR1-235ENST00000428153 MAN1B1Q9UKM7 699 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms