RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 LACTBL1A8MY62 500 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 CAVIN3Q969G5 261 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 ATXN3LQ9H3M9 355 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 NMRAL1Q9HBL8 299 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 DNALI1O14645 258 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 ATG7O95352 703 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 SERPINE1P05121 402 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 CCDC130P13994 396 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 ZNF7P17097 686 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 NPY2RP49146 381 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 FASTKQ14296 549 aaKnown RBP18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 DGKKQ5KSL6 1271 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 PLEKHA7Q6IQ23 1121 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 C16orf59Q7L2K0 433 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 ERLEC1Q96DZ1 483 aa18.34■□□□□ 0.53
ARHGEF28-203ENST00000426542 PQBP1O60828 265 aaKnown RBP18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 CLPTM1O96005 669 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 PTPN3P26045 913 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 GP5P40197 560 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 CSNK2BP67870 215 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 CDKAL1Q5VV42 579 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 SLC27A1Q6PCB7 646 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 WDR36Q8NI36 951 aaKnown RBP18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 THG1LQ9NWX6 298 aaKnown RBP18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 OR56A5P0C7T3 313 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 ATP6V1C1P21283 382 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 TALDO1P37837 337 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 ZNF470Q6ECI4 717 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 TCP10LQ8TDR4 215 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 NMD3Q96D46 503 aaKnown RBP18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 APBA2Q99767 749 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 HDHD2Q9H0R4 259 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 AVENQ9NQS1 362 aaPredicted RBP18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 RRN3Q9NYV6 651 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 VTI1BQ9UEU0 232 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 CROTQ9UKG9 612 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 SHOC2Q9UQ13 582 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 NDUFAF1Q9Y375 327 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 PPP2R3BQ9Y5P8 575 aa18.33■□□□□ 0.53
ARHGEF28-203ENST00000426542 TRAPPC12Q8WVT3 735 aa18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 CNPP09543 421 aaKnown RBP18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 COX10Q12887 443 aa18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 ATAD3BQ5T9A4 648 aa18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 PRMT9Q6P2P2 845 aa18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 DOK6Q6PKX4 331 aa18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 HEATR4Q86WZ0 1026 aa18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 EID3Q8N140 333 aa18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 REPS2Q8NFH8 660 aa18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 ATP6V1HQ9UI12 483 aa18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 ANKRD6Q9Y2G4 727 aa18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 SESN1Q9Y6P5 492 aa18.33■□□□□ 0.52
ARHGEF28-203ENST00000426542 E7ENQ6 273 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 ZNF862O60290 1169 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 GHRP10912 638 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 FLT3P36888 993 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 RPL21P46778 160 aaKnown RBP18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 CLK2P49760 499 aaKnown RBP18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 RNFT2Q96EX2 444 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 NLNQ9BYT8 704 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 OSBPL6Q9BZF3 934 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 POMKQ9H5K3 350 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 NDUFA13Q9P0J0 144 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 DPP7Q9UHL4 492 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 USP20Q9Y2K6 914 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 PCDHA3Q9Y5H8 950 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 CPS1P31327 1500 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 A8MX80 341 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 ATP9AO75110 1047 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 GSSP48637 474 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 AMPD2Q01433 879 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 MILR1Q7Z6M3 343 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 NSMCE2Q96MF7 247 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 SERPINB11Q96P15 392 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 TAS2R13Q9NYV9 303 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 CAMSAP1Q5T5Y3 1602 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 NR2C2P49116 596 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 CDH8P55286 799 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 SLC44A4Q53GD3 710 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 OR56A4Q8NGH8 313 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 C19orf60Q96EN9 201 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 APOPT1Q96IL0 206 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 PHACTR1Q9C0D0 580 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 SPRTNQ9H040 489 aaPredicted RBP18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 SERHL2Q9H4I8 314 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 SERHLQ9NQF3 203 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 KLHL3Q9UH77 587 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 VAPBO95292 243 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 FMO4P31512 558 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 SLC39A12Q504Y0 691 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 OTUD3Q5T2D3 398 aaPredicted RBP18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 CASP12Q6UXS9 341 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 DHFR2Q86XF0 187 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 DEFB106AQ8N104 65 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 SLC2A14Q8TDB8 520 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 USP7Q93009 1102 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 TMEM150BA6NC51 233 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 IGSF6O95976 241 aa18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 YBX3P16989 372 aaKnown RBP eCLIP18.32■□□□□ 0.52
ARHGEF28-203ENST00000426542 ST13P50502 369 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms