RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 CCP110O43303 1012 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 ENDOD1O94919 500 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 MOCS2O96007 188 aaPredicted RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 IGLV3-27P01718 113 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 MYBL1P10243 752 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 ARSAP15289 507 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 TCF4P15884 667 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 TCF3P15923 654 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 PFKLP17858 780 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 GPD1P21695 349 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 CORO1AP31146 461 aaKnown RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 NOS2P35228 1153 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 CYLC1P35663 651 aaPredicted RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 PTPN9P43378 593 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 ZNF143P52747 638 aaPredicted RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 VCPP55072 806 aaKnown RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 TBX4P57082 545 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 TNK2Q07912 1038 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 NME3Q13232 169 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 TRIP4Q15650 581 aaPredicted RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 CDO1Q16878 200 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 SLC25A52Q3SY17 297 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 ARTNQ5T4W7 220 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 NAIF1Q69YI7 327 aaPredicted RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 NADSYN1Q6IA69 706 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 PPP1R2P3Q6NXS1 205 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 ARCQ7LC44 396 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 TADA2BQ86TJ2 420 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 ALYREFQ86V81 257 aaKnown RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 RNF135Q8IUD6 432 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 MFSD6LQ8IWD5 586 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 BBS7Q8IWZ6 715 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 CELF5Q8N6W0 485 aaKnown RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 SLC35G2Q8TBE7 412 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 FAM172AQ8WUF8 416 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 CENPIQ92674 756 aaPredicted RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 TRIM11Q96F44 468 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 SLC39A13Q96H72 371 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 PPP1R9BQ96SB3 815 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 CDK5RAP1Q96SZ6 601 aaKnown RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 OSGEPQ9NPF4 335 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 OLA1Q9NTK5 396 aaKnown RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 PARVAQ9NVD7 372 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 DDIT4Q9NX09 232 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 OBP2AQ9NY56 170 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 CTTNBP2NLQ9P2B4 639 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 AGO1Q9UL18 857 aaKnown RBP5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 SNX10Q9Y5X0 201 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 C5orf42Q9H799 3197 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 OBSL1O75147 1896 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 MYO16Q9Y6X6 1858 aa5.94□□□□□ -1.46
HERPUD2-204ENST00000426180 E2F8A0AVK6 867 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 TMEM110-MUSTN1A8MSY1 372 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 SHISA8B8ZZ34 492 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 ARNTLO00327 626 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 ARHGAP6O43182 974 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 TSPAN3O60637 253 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 PTMAP06454 111 aaKnown RBP5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 PSMC3P17980 439 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 PSMA2P25787 234 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 GDI1P31150 447 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 SDC4P31431 198 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 SLC6A4P31645 630 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 ARHGAP25P42331 645 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 SOX9P48436 509 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 CXCR3P49682 368 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 SGSHP51688 502 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 HDAC4P56524 1084 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 COG7P83436 770 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 DEUP1Q05D60 604 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 FCHO2Q0JRZ9 810 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 CCDC173Q0VFZ6 552 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 SPA17Q15506 151 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 EML3Q32P44 896 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 PIK3R6Q5UE93 754 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 TXNRD3NBQ6F5E7 133 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 RFWD3Q6PCD5 774 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 DCUN1D2Q6PH85 259 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 CYP4V2Q6ZWL3 525 aaPredicted RBP5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 HTR3DQ70Z44 454 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 MTSS1LQ765P7 747 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 C14orf80Q86SX3 495 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 FAM131BQ86XD5 332 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 DENND1CQ8IV53 801 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 GJD3Q8N144 294 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 CCDC185Q8N715 623 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 ZNF564Q8TBZ8 553 aaPredicted RBP5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 BPIFB1Q8TDL5 484 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 OSCP1Q8WVF1 389 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 EDARADDQ8WWZ3 215 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 CTNNBL1Q8WYA6 563 aaPredicted RBP5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 ANP32BQ92688 251 aaKnown RBP5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 PLD4Q96BZ4 506 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 PGAP3Q96FM1 320 aaPredicted RBP5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 SERPINB11Q96P15 392 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 PEBP4Q96S96 227 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 UHRF1Q96T88 793 aaPredicted RBP5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 FAM83CQ9BQN1 747 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 CNPY3Q9BT09 278 aa5.93□□□□□ -1.46
HERPUD2-204ENST00000426180 EBF3Q9H4W6 596 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms