RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 IRGQQ8WZA9 623 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 EDEM1Q92611 657 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 AZIN2Q96A70 460 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 UBL7Q96S82 380 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ELF4Q99607 663 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 GDF3Q9NR23 364 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 STIM2Q9P246 746 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 STOML2Q9UJZ1 356 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TSPAN16Q9UKR8 245 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PCNX2A6NKB5 2137 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ASCC3Q8N3C0 2202 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 A0A087WV48 116 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 A0A1W2PPC4 97 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 H0Y8X5 98 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TK2O00142 265 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 KCNK3O14649 394 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ENC1O14682 589 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PAPSS1O43252 624 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SART1O43290 800 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ACSL4O60488 711 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 RNASEH2AO75792 299 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 FBXO21O94952 628 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SRPRAP08240 638 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 LCP1P13796 627 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CD38P28907 300 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 NUDT1P36639 197 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 OXCT1P55809 520 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBX4P57082 545 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 DNM1Q05193 864 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ADIGQ0VDE8 80 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CDH18Q13634 790 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 C1orf220Q5T0J3 134 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 DHRS13Q6UX07 377 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 KIAA1549LQ6ZVL6 1849 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 DSG4Q86SJ6 1040 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SCML4Q8N228 414 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 HJURPQ8NCD3 748 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 OR2T34Q8NGX1 318 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 FIBINQ8TAL6 211 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SNX21Q969T3 373 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 HOOK1Q9UJC3 728 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 FZD4Q9ULV1 537 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CLEC4EQ9ULY5 219 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 MYO16Q9Y6X6 1858 aa12.75□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBC1D3DA0A087WVF3 549 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBC1D3IA0A087WXS9 549 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBC1D3EA0A087X179 549 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBC1D3KA0A087X1G2 549 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 A0A1B0GTQ1 180 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBC1D3FA6NER0 549 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBC1D3LB9A6J9 549 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 RFPL3O75679 317 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBC1D3HP0C7X1 549 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SLC8A1P32418 973 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CTSKP43235 329 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 GALCP54803 685 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 FKBP3Q00688 224 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 BNC1Q01954 994 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ILKQ13418 452 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CUL2Q13617 745 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 DCAF17Q5H9S7 520 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PIK3R6Q5UE93 754 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TMEM215Q68D42 235 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBC1D3GQ6DHY5 549 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBC1D3CQ6IPX1 549 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 KIAA0907Q7Z7F0 614 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ADIPOR2Q86V24 386 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBC1D3Q8IZP1 549 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CARNMT1Q8N4J0 409 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ZNF366Q8N895 744 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CNDP2Q96KP4 475 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SERPINB11Q96P15 392 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 RSPH9Q9H1X1 276 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PABPC3Q9H361 631 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 EVA1BQ9NVM1 165 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TJP2Q9UDY2 1190 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PLXND1Q9Y4D7 1925 aa12.74□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CHD6Q8TD26 2715 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PTPRDP23468 1912 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 EDDM13A0A1B0GTR0 161 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 FAM149AA5PLN7 773 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 DKK1O94907 266 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ADH1BP00325 375 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 APOEP02649 317 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PAEPP09466 180 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 GOT1P17174 413 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 C5AR1P21730 350 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CCR5P51681 352 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SULT2A1Q06520 285 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 STIM1Q13586 685 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SLC12A1Q13621 1099 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 STAT4Q14765 748 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CST6Q15828 149 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 HNRNPA1L2Q32P51 320 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 FAM46CQ5VWP2 391 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 RBBP8NLQ8NC74 664 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms